RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 TBL3Q12788 808 aaKnown RBP12.52□□□□□ -0.4
RTN3-203ENST00000341307 GRM2Q14416 872 aa12.52□□□□□ -0.4
RTN3-203ENST00000341307 ANKK1Q8NFD2 765 aa12.52□□□□□ -0.4
RTN3-203ENST00000341307 RAD54LQ92698 747 aa12.52□□□□□ -0.4
RTN3-203ENST00000341307 PPP1R10Q96QC0 940 aaKnown RBP12.52□□□□□ -0.4
RTN3-203ENST00000341307 FZD1Q9UP38 647 aa12.52□□□□□ -0.4
RTN3-203ENST00000341307 SSU72P8A0A1W2PR75 194 aa12.52□□□□□ -0.41
RTN3-203ENST00000341307 FOXO6A8MYZ6 492 aa12.52□□□□□ -0.41
RTN3-203ENST00000341307 RASGRF2O14827 1237 aa12.52□□□□□ -0.41
RTN3-203ENST00000341307 OPHN1O60890 802 aa12.52□□□□□ -0.41
RTN3-203ENST00000341307 CACNB1Q02641 598 aaPredicted RBP12.52□□□□□ -0.41
RTN3-203ENST00000341307 NSUN2Q08J23 767 aaKnown RBP eCLIP12.52□□□□□ -0.41
RTN3-203ENST00000341307 ADRM1Q16186 407 aa12.52□□□□□ -0.41
RTN3-203ENST00000341307 ANKRD40Q6AI12 368 aa12.52□□□□□ -0.41
RTN3-203ENST00000341307 MFSD5Q6N075 450 aa12.52□□□□□ -0.41
RTN3-203ENST00000341307 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.52□□□□□ -0.413e-7■■■□□ 19.1
RTN3-203ENST00000341307 MTMR14Q8NCE2 650 aa12.52□□□□□ -0.41
RTN3-203ENST00000341307 CRYGNQ8WXF5 182 aa12.52□□□□□ -0.41
RTN3-203ENST00000341307 ARHGEF2Q92974 986 aaKnown RBP12.52□□□□□ -0.41
RTN3-203ENST00000341307 PACSIN1Q9BY11 444 aa12.52□□□□□ -0.41
RTN3-203ENST00000341307 STMN4Q9H169 189 aaPredicted RBP12.52□□□□□ -0.41
RTN3-203ENST00000341307 SYNCQ9H7C4 482 aa12.52□□□□□ -0.41
RTN3-203ENST00000341307 MAGEF1Q9HAY2 307 aa12.52□□□□□ -0.41
RTN3-203ENST00000341307 KIAA1024Q9UPX6 916 aa12.52□□□□□ -0.41
RTN3-203ENST00000341307 POTEB3A0JP26 581 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 TRAF5O00463 557 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 PSMA7O14818 248 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 STRNO43815 780 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 TAC1P20366 129 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 FOXN2P32314 431 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 MTIF2P46199 727 aaKnown RBP12.51□□□□□ -0.41
RTN3-203ENST00000341307 AMPD3Q01432 767 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 PTPROQ16827 1216 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 KLHDC10Q6PID8 442 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 POTEBQ6S5H4 581 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 POTEEQ6S8J3 1075 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 ZDHHC24Q6UX98 284 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 RBM44Q6ZP01 1051 aaKnown RBP12.51□□□□□ -0.41
RTN3-203ENST00000341307 ACAD11Q709F0 780 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 FAM83AQ86UY5 434 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 CSGALNACT2Q8N6G5 542 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 METTL13Q8N6R0 699 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 DDX12PQ92771 950 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 LENG9Q96B70 501 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 GRAMD1AQ96CP6 724 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 TPK1Q9H3S4 243 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 EBF3Q9H4W6 596 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 EURLQ9NYK6 297 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 NDUFA13Q9P0J0 144 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 TSC22D4Q9Y3Q8 395 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 PCSK6P29122 969 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 CRABP2P29373 138 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 CDR2Q01850 454 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 MOGSQ13724 837 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 LRRC41Q15345 812 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 TMEM119Q4V9L6 283 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 C6orf183Q5T699 404 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 DUPD1Q68J44 220 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 PATL1Q86TB9 770 aaKnown RBP12.51□□□□□ -0.41
RTN3-203ENST00000341307 FAM186BQ8IYM0 893 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 SYT2Q8N9I0 419 aaPredicted RBP12.51□□□□□ -0.41
RTN3-203ENST00000341307 CASP10Q92851 521 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 ATP6V0A1Q93050 837 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 MAGEB18Q96M61 343 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 PRICKLE1Q96MT3 831 aaPredicted RBP12.51□□□□□ -0.41
RTN3-203ENST00000341307 CGREF1Q99674 301 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 ZNF341Q9BYN7 854 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 NT5C3AQ9H0P0 336 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 ADARB2Q9NS39 739 aaKnown RBP12.51□□□□□ -0.41
RTN3-203ENST00000341307 STK17AQ9UEE5 414 aa12.51□□□□□ -0.41
RTN3-203ENST00000341307 IQCA1LA6NCM1 817 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 MAPK13O15264 365 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 MED24O75448 989 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 TCF7P36402 384 aaPredicted RBP12.5□□□□□ -0.41
RTN3-203ENST00000341307 HTRA3P83110 453 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 CDC16Q13042 620 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 AP3B2Q13367 1082 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 ANGEL2Q5VTE6 544 aaKnown RBP12.5□□□□□ -0.41
RTN3-203ENST00000341307 FKBP1CQ5VVH2 108 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 TMEM214Q6NUQ4 689 aaKnown RBP12.5□□□□□ -0.41
RTN3-203ENST00000341307 PDXDC1Q6P996 788 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 CROCCP2Q86T23 111 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 SCAIQ8N9R8 606 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 CENPOQ9BU64 300 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 PITPNM3Q9BZ71 974 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 GLT8D2Q9H1C3 349 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 EMILIN3Q9NT22 766 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.5□□□□□ -0.41
RTN3-203ENST00000341307 POTEFA5A3E0 1075 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 MEIS1O00470 390 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 TBC1D12O60347 775 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 STK10O94804 968 aaKnown RBP12.5□□□□□ -0.41
RTN3-203ENST00000341307 ZNF280AP59817 542 aaPredicted RBP12.5□□□□□ -0.41
RTN3-203ENST00000341307 INAQ16352 499 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 POTEGQ6S5H5 508 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 RASGEF1CQ8N431 466 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 ETNPPLQ8TBG4 499 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 FBXO25Q8TCJ0 367 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 SREK1Q8WXA9 508 aaKnown RBP12.5□□□□□ -0.41
RTN3-203ENST00000341307 P2RX5Q93086 422 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms