RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ECSITQ9BQ95 431 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 PALLDQ8WX93 1383 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 STRNO43815 780 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 PMPCBO75439 489 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 YY1P25490 414 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 QRICH1Q2TAL8 776 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 IER5Q5VY09 327 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 ARL6IP4Q66PJ3 421 aaKnown RBP12.3□□□□□ -0.44
SHANK2-201ENST00000338508 KLHL24Q6TFL4 600 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 NLRP14Q86W24 1093 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 P3H2Q8IVL5 708 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 RNASE11Q8TAA1 199 aaKnown RBP12.3□□□□□ -0.44
SHANK2-201ENST00000338508 KLF6Q99612 283 aaPredicted RBP12.3□□□□□ -0.44
SHANK2-201ENST00000338508 THUMPD3Q9BV44 507 aaKnown RBP12.3□□□□□ -0.44
SHANK2-201ENST00000338508 SH3GLB2Q9NR46 395 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 CHMP2BQ9UQN3 213 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 ATP7AQ04656 1500 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 EVPLLA8MZ36 301 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 TPST1O60507 370 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 H2AFYO75367 372 aaKnown RBP12.3□□□□□ -0.44
SHANK2-201ENST00000338508 KRT75O95678 551 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 MYBL1P10243 752 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 PFKFB3Q16875 520 aaPredicted RBP12.3□□□□□ -0.44
SHANK2-201ENST00000338508 BTN2A1Q7KYR7 527 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 BLOC1S5Q8TDH9 187 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 TSPAN17Q96FV3 270 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 CINPQ9BW66 212 aaPredicted RBP12.3□□□□□ -0.44
SHANK2-201ENST00000338508 KLF15Q9UIH9 416 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 SNX8Q9Y5X2 465 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 IQCA1LA6NCM1 817 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 MAP3K6O95382 1288 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 FGFR1P11362 822 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 HIST2H2ACQ16777 129 aaPredicted RBP12.3□□□□□ -0.44
SHANK2-201ENST00000338508 HIST2H2AA3Q6FI13 130 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 ZNF438Q7Z4V0 828 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 PARP9Q8IXQ6 854 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 REXO4Q9GZR2 422 aaKnown RBP12.3□□□□□ -0.44
SHANK2-201ENST00000338508 TAF1DQ9H5J8 278 aaPredicted RBP12.3□□□□□ -0.44
SHANK2-201ENST00000338508 MINPP1Q9UNW1 487 aa12.3□□□□□ -0.44
SHANK2-201ENST00000338508 ASB14A6NK59 587 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 LGALS16A8MUM7 142 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 PNMA6AP0CW24 399 aaPredicted RBP12.29□□□□□ -0.44
SHANK2-201ENST00000338508 RESTQ13127 1097 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 STX3Q13277 289 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 TMEM154Q6P9G4 183 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 MTHFD1LQ6UB35 978 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 TBC1D10CQ8IV04 446 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 CARNMT1Q8N4J0 409 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 EXD1Q8NHP7 514 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 STN1Q9H668 368 aaKnown RBP12.29□□□□□ -0.44
SHANK2-201ENST00000338508 CD209Q9NNX6 404 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 ALDH7A1P49419 539 aaKnown RBP12.29□□□□□ -0.44
SHANK2-201ENST00000338508 SNX17Q15036 470 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 GOLGA7BQ2TAP0 167 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 HAUS6Q7Z4H7 955 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 SCN3BQ9NY72 215 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 ASS1P00966 412 aaKnown RBP12.29□□□□□ -0.44
SHANK2-201ENST00000338508 CLEC16AQ2KHT3 1053 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 HASPINQ8TF76 798 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 AGPAT1Q99943 283 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 UTYO14607 1347 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 UNC13AQ9UPW8 1703 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 AATKQ6ZMQ8 1374 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 M0R3G1 203 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 DLGAP3O95886 979 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 ENO2P09104 434 aaPredicted RBP12.29□□□□□ -0.44
SHANK2-201ENST00000338508 PSMA3P25788 255 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 KCNB1Q14721 858 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 MED15Q96RN5 788 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 PRPF18Q99633 342 aaKnown RBP12.29□□□□□ -0.44
SHANK2-201ENST00000338508 KCTD10Q9H3F6 313 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 GID8Q9NWU2 228 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 LIMA1Q9UHB6 759 aaKnown RBP12.29□□□□□ -0.44
SHANK2-201ENST00000338508 PADI4Q9UM07 663 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 ADAMTS12P58397 1594 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 E9PBE3 544 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 CHUKO15111 745 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 CPSF4O95639 269 aaKnown RBP12.29□□□□□ -0.44
SHANK2-201ENST00000338508 GGPS1O95749 300 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 TNNI3P19429 210 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 DNAJB2P25686 324 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 YWHAQP27348 245 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 FBXW10Q5XX13 1052 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 PLA2G4FQ68DD2 849 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 CNDP1Q96KN2 507 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 PCDHA10Q9Y5I2 948 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 FAM135BQ49AJ0 1406 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 A0A1B0GW55 424 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 LRRIQ3A6PVS8 624 aaPredicted RBP12.29□□□□□ -0.44
SHANK2-201ENST00000338508 DUX4L2P0CJ85 424 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 DUX4L3P0CJ86 424 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 DUX4L4P0CJ87 422 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 DUX4L5P0CJ88 424 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 DUX4L6P0CJ89 424 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 DUX4L7P0CJ90 424 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 HSPA9P38646 679 aaKnown RBP12.29□□□□□ -0.44
SHANK2-201ENST00000338508 DMTNQ08495 405 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 ORC1Q13415 861 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 NFIL3Q16649 462 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 NT5DC4Q86YG4 428 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms