RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 MFSD7Q6UXD7 560 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 PNMA8AQ86V59 439 aaPredicted RBP10.29□□□□□ -0.76
MSL3-202ENST00000337339 ANKMY2Q8IV38 441 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 CCDC197Q8NCU1 140 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 REPS2Q8NFH8 660 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 SEC14L1Q92503 715 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 DCPSQ96C86 337 aaKnown RBP10.29□□□□□ -0.76
MSL3-202ENST00000337339 RBM15Q96T37 977 aaKnown RBP eCLIP10.29□□□□□ -0.76
MSL3-202ENST00000337339 CCDC77Q9BR77 488 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 TMEM121Q9BTD3 319 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 MTFR1LQ9H019 292 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 SPATC1LQ9H0A9 340 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 EPB41L4BQ9H329 900 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 HOMER3Q9NSC5 361 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.29□□□□□ -0.76
MSL3-202ENST00000337339 DNPEPQ9ULA0 475 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 POLIQ9UNA4 740 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 CENPFP49454 3210 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 A0A0B4J269 797 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 TCP11X1B4DZS4 312 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 ADCY3O60266 1144 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 STAM2O75886 525 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 TNNC2P02585 160 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 PSMA2P25787 234 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 HADHBP55084 474 aaKnown RBP10.29□□□□□ -0.76
MSL3-202ENST00000337339 LAMTOR4Q0VGL1 99 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 AUHQ13825 339 aaKnown RBP10.29□□□□□ -0.76
MSL3-202ENST00000337339 TXNRD3NBQ6F5E7 133 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 CCDC89Q8N998 374 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 TMEM35BQ8NCS4 154 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 MAIP1Q8WWC4 291 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 HSPH1Q92598 858 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 VPS33BQ9H267 617 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 DHX33Q9H6R0 707 aaKnown RBP10.29□□□□□ -0.76
MSL3-202ENST00000337339 AKT3Q9Y243 479 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 FSCN2O14926 492 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 FARP2O94887 1054 aaPredicted RBP10.29□□□□□ -0.76
MSL3-202ENST00000337339 CXCL8P10145 99 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 ITIH2P19823 946 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 TBXAS1P24557 533 aaPredicted RBP10.29□□□□□ -0.76
MSL3-202ENST00000337339 GBP1P32455 592 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 SLC1A1P43005 524 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 SCYL2Q6P3W7 929 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 GLIS1Q8NBF1 620 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 ART4Q93070 314 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 CGRRF1Q99675 332 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 LRRC19Q9H756 370 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 FGFR1OP2Q9NVK5 253 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 TJP2Q9UDY2 1190 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 KCNG1Q9UIX4 513 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 SCINQ9Y6U3 715 aa10.29□□□□□ -0.76
MSL3-202ENST00000337339 EXOC1LA0A1B0GW35 172 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 TOM1L1O75674 476 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 MYBL1P10243 752 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 TXNP10599 105 aaKnown RBP10.28□□□□□ -0.76
MSL3-202ENST00000337339 NEFHP12036 1026 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 DRG2P55039 364 aaKnown RBP10.28□□□□□ -0.76
MSL3-202ENST00000337339 SIX1Q15475 284 aaPredicted RBP10.28□□□□□ -0.76
MSL3-202ENST00000337339 ANKS1BQ7Z6G8 1248 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 DDX27Q96GQ7 796 aaKnown RBP10.28□□□□□ -0.76
MSL3-202ENST00000337339 TRAIPQ9BWF2 469 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 NKIRAS1Q9NYS0 192 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 GPRC5DQ9NZD1 345 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 MAFBQ9Y5Q3 323 aaPredicted RBP10.28□□□□□ -0.76
MSL3-202ENST00000337339 SOWAHBA6NEL2 793 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 RASA4BC9J798 803 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 RASA4O43374 803 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 ZC3H11AO75152 810 aaKnown RBP eCLIP10.28□□□□□ -0.76
MSL3-202ENST00000337339 BANF1O75531 89 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 ARIH2O95376 493 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 GH1P01241 217 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 OAZ1P54368 228 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 PSMC1P62191 440 aaKnown RBP10.28□□□□□ -0.76
MSL3-202ENST00000337339 CENPCQ03188 943 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 TMEM62Q0P6H9 643 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 SEPT7Q16181 437 aaKnown RBP10.28□□□□□ -0.76
MSL3-202ENST00000337339 EEF1DP3Q658K8 133 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 EFCAB12Q6NXP0 572 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 MON1BQ7L1V2 547 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 EXOC3L1Q86VI1 746 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 TMEM192Q8IY95 271 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 ZBED8Q8IZ13 594 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 UBA3Q8TBC4 463 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 PDGFCQ9NRA1 345 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 IP6K2Q9UHH9 426 aa10.28□□□□□ -0.76
MSL3-202ENST00000337339 WDR91A4D1P6 747 aa10.27□□□□□ -0.76
MSL3-202ENST00000337339 USP2O75604 605 aaPredicted RBP10.27□□□□□ -0.76
MSL3-202ENST00000337339 AGTP01019 485 aa10.27□□□□□ -0.76
MSL3-202ENST00000337339 NUDT17P0C025 328 aa10.27□□□□□ -0.76
MSL3-202ENST00000337339 EAPPQ56P03 285 aaPredicted RBP10.27□□□□□ -0.76
MSL3-202ENST00000337339 C4orf33Q8N1A6 199 aa10.27□□□□□ -0.76
MSL3-202ENST00000337339 CHST13Q8NET6 341 aa10.27□□□□□ -0.76
MSL3-202ENST00000337339 ANKRD36BP1Q96IX9 119 aa10.27□□□□□ -0.76
MSL3-202ENST00000337339 HEXIM2Q96MH2 286 aaKnown RBP10.27□□□□□ -0.76
MSL3-202ENST00000337339 PCYT2Q99447 389 aa10.27□□□□□ -0.76
MSL3-202ENST00000337339 PDLIM7Q9NR12 457 aa10.27□□□□□ -0.76
MSL3-202ENST00000337339 HAUS2Q9NVX0 235 aa10.27□□□□□ -0.76
MSL3-202ENST00000337339 MTA2O94776 668 aa10.27□□□□□ -0.77
MSL3-202ENST00000337339 TJP3O95049 919 aa10.27□□□□□ -0.77
MSL3-202ENST00000337339 TTC4O95801 387 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms