RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SGPL1O95470 568 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 LINGO3P0C6S8 592 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 TPBGLP0DKB5 382 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 ANXA13P27216 316 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 MAPK10P53779 464 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 GEMIN4P57678 1058 aaKnown RBP13.9□□□□□ -0.18
COL2A1-201ENST00000337299 EFHC1Q5JVL4 640 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 MROH9Q5TGP6 573 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 UTS2BQ765I0 119 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 DNAAF3Q8N9W5 541 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 LINC00116Q8NCU8 138 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 CNKSR1Q969H4 720 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 ABCB11O95342 1321 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 PPLO60437 1756 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 CAMTA2O94983 1202 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 VAV1P15498 845 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 SSTR1P30872 391 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 BAG6P46379 1132 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 ZNF34Q8IZ26 560 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 CCNYQ8ND76 341 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 ALG3Q92685 438 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 CASP10Q92851 521 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 NRBF2Q96F24 287 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 KCNK16Q96T55 309 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 NDEL1Q9GZM8 345 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 PREBQ9HCU5 417 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 KMT5AQ9NQR1 393 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 WHRNQ9P202 907 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 ZNF212Q9UDV6 495 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 DOLKQ9UPQ8 538 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 FOSP01100 380 aaPredicted RBP13.9□□□□□ -0.18
COL2A1-201ENST00000337299 POLR2MP0CAP2 368 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 HNRNPH3P31942 346 aaKnown RBP13.9□□□□□ -0.18
COL2A1-201ENST00000337299 EIF2B2P49770 351 aaKnown RBP13.9□□□□□ -0.18
COL2A1-201ENST00000337299 FLOT2Q14254 428 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 C1orf228Q6PIY5 440 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 MTHFD1LQ6UB35 978 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 RBM44Q6ZP01 1051 aaKnown RBP13.9□□□□□ -0.18
COL2A1-201ENST00000337299 PIGWQ7Z7B1 504 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 NGRNQ9NPE2 291 aaKnown RBP13.9□□□□□ -0.18
COL2A1-201ENST00000337299 HERC5Q9UII4 1024 aaKnown RBP13.9□□□□□ -0.18
COL2A1-201ENST00000337299 MEGF6O75095 1541 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 C5orf60A6NFR6 353 aa13.9□□□□□ -0.19
COL2A1-201ENST00000337299 ZBTB39O15060 712 aa13.9□□□□□ -0.19
COL2A1-201ENST00000337299 NPTXRO95502 500 aa13.9□□□□□ -0.19
COL2A1-201ENST00000337299 CSF1RP07333 972 aa13.9□□□□□ -0.19
COL2A1-201ENST00000337299 HOXA7P31268 230 aaPredicted RBP13.9□□□□□ -0.19
COL2A1-201ENST00000337299 TRIM16LQ309B1 348 aa13.9□□□□□ -0.19
COL2A1-201ENST00000337299 SYDE1Q6ZW31 735 aaPredicted RBP13.9□□□□□ -0.19
COL2A1-201ENST00000337299 LPCAT2Q7L5N7 544 aa13.9□□□□□ -0.19
COL2A1-201ENST00000337299 ADGRA1Q86SQ6 560 aa13.9□□□□□ -0.19
COL2A1-201ENST00000337299 ERLEC1Q96DZ1 483 aa13.9□□□□□ -0.19
COL2A1-201ENST00000337299 KLHL25Q9H0H3 589 aa13.9□□□□□ -0.19
COL2A1-201ENST00000337299 CYLDQ9NQC7 956 aa13.9□□□□□ -0.19
COL2A1-201ENST00000337299 UVRAGQ9P2Y5 699 aa13.9□□□□□ -0.19
COL2A1-201ENST00000337299 KDM4FA0A1W2PPD8 638 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 SLC5A9Q2M3M2 681 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 OLFML1Q6UWY5 402 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 TSHZ1Q6ZSZ6 1077 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 DEPTORQ8TB45 409 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 RUSC1Q9BVN2 902 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 ACP6Q9NPH0 428 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 C20orf96Q9NUD7 363 aaPredicted RBP13.89□□□□□ -0.19
COL2A1-201ENST00000337299 BLOC1S4Q9NUP1 217 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 XPO7Q9UIA9 1087 aaKnown RBP13.89□□□□□ -0.19
COL2A1-201ENST00000337299 SERPINB13Q9UIV8 391 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 PYGBP11216 843 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 FECHP22830 423 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 OCRLQ01968 901 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 HGSNATQ68CP4 663 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 DSTYKQ6XUX3 929 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 TMPRSS6Q8IU80 811 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 NIM1KQ8IY84 436 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 ADGRF4Q8IZF3 695 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 ZNF786Q8N393 782 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 ALKBH8Q96BT7 664 aaKnown RBP13.89□□□□□ -0.19
COL2A1-201ENST00000337299 HDAC11Q96DB2 347 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 EIF2AK1Q9BQI3 630 aaKnown RBP13.89□□□□□ -0.19
COL2A1-201ENST00000337299 PI4K2AQ9BTU6 479 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 CCDC134Q9H6E4 229 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 CD209Q9NNX6 404 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 SLC9A2Q9UBY0 812 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 COMMD3-BMI1R4GMX3 469 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 C2orf71A6NGG8 1288 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 IRF6O14896 467 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 STRNO43815 780 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 APRTP07741 180 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 LYNP07948 512 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 NUDT2P50583 147 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 PSMD7P51665 324 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 SMTNL2Q2TAL5 461 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 RFWD3Q6PCD5 774 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 LRRC55Q6ZSA7 311 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 SDCCAG3Q96C92 435 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 L3MBTL3Q96JM7 780 aaPredicted RBP13.89□□□□□ -0.19
COL2A1-201ENST00000337299 PNMA5Q96PV4 448 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 PAFAH2Q99487 392 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 TTYH3Q9C0H2 523 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 DNAJC18Q9H819 358 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 ZNF408Q9H9D4 720 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms