RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 SEMA4AQ9H3S1 761 aa19.2■□□□□ 0.66
CMTM1-204ENST00000336328 CUEDC2Q9H467 287 aa19.2■□□□□ 0.66
CMTM1-204ENST00000336328 FOXD4L1Q9NU39 408 aa19.2■□□□□ 0.66
CMTM1-204ENST00000336328 PANK4Q9NVE7 773 aa19.2■□□□□ 0.66
CMTM1-204ENST00000336328 MRPS17Q9Y2R5 130 aaKnown RBP19.2■□□□□ 0.66
CMTM1-204ENST00000336328 SPTLC2O15270 562 aa19.19■□□□□ 0.66
CMTM1-204ENST00000336328 FGF19O95750 216 aa19.19■□□□□ 0.66
CMTM1-204ENST00000336328 CYP11A1P05108 521 aa19.19■□□□□ 0.66
CMTM1-204ENST00000336328 MYL4P12829 197 aa19.19■□□□□ 0.66
CMTM1-204ENST00000336328 GARTP22102 1010 aa19.19■□□□□ 0.66
CMTM1-204ENST00000336328 PNPLA4P41247 253 aa19.19■□□□□ 0.66
CMTM1-204ENST00000336328 MAGEA9P43362 315 aa19.19■□□□□ 0.66
CMTM1-204ENST00000336328 TUFMP49411 452 aaKnown RBP19.19■□□□□ 0.66
CMTM1-204ENST00000336328 GUCY2FP51841 1108 aa19.19■□□□□ 0.66
CMTM1-204ENST00000336328 DUSP4Q13115 394 aa19.19■□□□□ 0.66
CMTM1-204ENST00000336328 ITIH5Q86UX2 942 aa19.19■□□□□ 0.66
CMTM1-204ENST00000336328 LINC00301Q8NCQ3 95 aa19.19■□□□□ 0.66
CMTM1-204ENST00000336328 NKD2Q969F2 451 aaPredicted RBP19.19■□□□□ 0.66
CMTM1-204ENST00000336328 BORCS6Q96GS4 357 aa19.19■□□□□ 0.66
CMTM1-204ENST00000336328 CEP72Q9P209 647 aa19.19■□□□□ 0.66
CMTM1-204ENST00000336328 RIF1Q5UIP0 2472 aaKnown RBP19.19■□□□□ 0.66
CMTM1-204ENST00000336328 CYB561D2O14569 222 aa19.18■□□□□ 0.66
CMTM1-204ENST00000336328 KIAA0391O15091 583 aaKnown RBP19.18■□□□□ 0.66
CMTM1-204ENST00000336328 HSP90AA1P07900 732 aaKnown RBP19.18■□□□□ 0.66
CMTM1-204ENST00000336328 NFICP08651 508 aa19.18■□□□□ 0.66
CMTM1-204ENST00000336328 CEBPBP17676 345 aa19.18■□□□□ 0.66
CMTM1-204ENST00000336328 SV2CQ496J9 727 aa19.18■□□□□ 0.66
CMTM1-204ENST00000336328 TANGO2Q6ICL3 276 aa19.18■□□□□ 0.66
CMTM1-204ENST00000336328 CENPPQ6IPU0 288 aa19.18■□□□□ 0.66
CMTM1-204ENST00000336328 PJA1Q8NG27 643 aa19.18■□□□□ 0.66
CMTM1-204ENST00000336328 C2orf15Q8WU43 125 aaKnown RBP19.18■□□□□ 0.66
CMTM1-204ENST00000336328 DNASE1L2Q92874 299 aa19.18■□□□□ 0.66
CMTM1-204ENST00000336328 SMARCD2Q92925 531 aa19.18■□□□□ 0.66
CMTM1-204ENST00000336328 IRF7Q92985 503 aa19.18■□□□□ 0.66
CMTM1-204ENST00000336328 ZNF560Q96MR9 790 aa19.18■□□□□ 0.66
CMTM1-204ENST00000336328 PGLYRP2Q96PD5 576 aa19.18■□□□□ 0.66
CMTM1-204ENST00000336328 DDX23Q9BUQ8 820 aaKnown RBP19.18■□□□□ 0.66
CMTM1-204ENST00000336328 TRMT61BQ9BVS5 477 aaKnown RBP19.18■□□□□ 0.66
CMTM1-204ENST00000336328 BCO2Q9BYV7 579 aa19.18■□□□□ 0.66
CMTM1-204ENST00000336328 TBC1D7Q9P0N9 293 aa19.18■□□□□ 0.66
CMTM1-204ENST00000336328 R3HCC1Q9Y3T6 440 aaKnown RBP19.18■□□□□ 0.66
CMTM1-204ENST00000336328 YIPF1Q9Y548 306 aa19.18■□□□□ 0.66
CMTM1-204ENST00000336328 FRMD3A2A2Y4 597 aa19.17■□□□□ 0.66
CMTM1-204ENST00000336328 DCNP07585 359 aaKnown RBP19.17■□□□□ 0.66
CMTM1-204ENST00000336328 ADSSP30520 456 aa19.17■□□□□ 0.66
CMTM1-204ENST00000336328 FAM78AQ5JUQ0 283 aa19.17■□□□□ 0.66
CMTM1-204ENST00000336328 CRELD2Q6UXH1 353 aaPredicted RBP19.17■□□□□ 0.66
CMTM1-204ENST00000336328 C1orf210Q8IVY1 113 aa19.17■□□□□ 0.66
CMTM1-204ENST00000336328 PDILTQ8N807 584 aa19.17■□□□□ 0.66
CMTM1-204ENST00000336328 IQUBQ8NA54 791 aa19.17■□□□□ 0.66
CMTM1-204ENST00000336328 TCEAL4Q96EI5 215 aa19.17■□□□□ 0.66
CMTM1-204ENST00000336328 ASB16Q96NS5 453 aa19.17■□□□□ 0.66
CMTM1-204ENST00000336328 PYM1Q9BRP8 204 aaKnown RBP19.17■□□□□ 0.66
CMTM1-204ENST00000336328 FAM213AQ9BRX8 229 aa19.17■□□□□ 0.66
CMTM1-204ENST00000336328 TNMDQ9H2S6 317 aa19.17■□□□□ 0.66
CMTM1-204ENST00000336328 BRD9Q9H8M2 597 aa19.17■□□□□ 0.66
CMTM1-204ENST00000336328 FAM170BA6NMN3 283 aa19.16■□□□□ 0.66
CMTM1-204ENST00000336328 KPNA7A9QM74 516 aa19.16■□□□□ 0.66
CMTM1-204ENST00000336328 TISP43B9A030 160 aa19.16■□□□□ 0.66
CMTM1-204ENST00000336328 MAN2B1O00754 1011 aa19.16■□□□□ 0.66
CMTM1-204ENST00000336328 PPEF2O14830 753 aa19.16■□□□□ 0.66
CMTM1-204ENST00000336328 YEATS4O95619 227 aa19.16■□□□□ 0.66
CMTM1-204ENST00000336328 OR4Q2P0C623 313 aa19.16■□□□□ 0.66
CMTM1-204ENST00000336328 PSMC3P17980 439 aa19.16■□□□□ 0.66
CMTM1-204ENST00000336328 ZNF852Q6ZMS4 543 aa19.16■□□□□ 0.66
CMTM1-204ENST00000336328 HSCBQ8IWL3 235 aa19.16■□□□□ 0.66
CMTM1-204ENST00000336328 DCP1BQ8IZD4 617 aaKnown RBP19.16■□□□□ 0.66
CMTM1-204ENST00000336328 HS6ST3Q8IZP7 471 aa19.16■□□□□ 0.66
CMTM1-204ENST00000336328 DEPDC1BQ8WUY9 529 aa19.16■□□□□ 0.66
CMTM1-204ENST00000336328 TRPV4Q9HBA0 871 aa19.16■□□□□ 0.66
CMTM1-204ENST00000336328 TRPV5Q9NQA5 729 aa19.16■□□□□ 0.66
CMTM1-204ENST00000336328 DLGAP2Q9P1A6 1054 aa19.16■□□□□ 0.66
CMTM1-204ENST00000336328 TFIP11Q9UBB9 837 aaKnown RBP19.16■□□□□ 0.66
CMTM1-204ENST00000336328 FAM186AA6NE01 2351 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 MTMR11A4FU01 709 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 TULP1O00294 542 aaPredicted RBP19.15■□□□□ 0.66
CMTM1-204ENST00000336328 SPTLC1O15269 473 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 EXTL3O43909 919 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 CUTAO60888 179 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 CCR2P41597 374 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 UBXN2BQ14CS0 331 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 VEPH1Q14D04 833 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 SURF1Q15526 300 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 TAF12Q16514 161 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 ATL3Q6DD88 541 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 ZC3H14Q6PJT7 736 aaKnown RBP19.15■□□□□ 0.66
CMTM1-204ENST00000336328 FRMD5Q7Z6J6 570 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 DNAJB7Q7Z6W7 309 aaPredicted RBP19.15■□□□□ 0.66
CMTM1-204ENST00000336328 ATAD1Q8NBU5 361 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 SPPL2BQ8TCT7 592 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 PLA2G2FQ9BZM2 168 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 FOXQ1Q9C009 403 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 ZCWPW1Q9H0M4 648 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 SLITRK6Q9H5Y7 841 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 SLC27A5Q9Y2P5 690 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 SCN1AP35498 2009 aa19.15■□□□□ 0.66
CMTM1-204ENST00000336328 ANK1P16157 1881 aa19.14■□□□□ 0.65
CMTM1-204ENST00000336328 PRR23AA6NEV1 266 aa19.14■□□□□ 0.65
CMTM1-204ENST00000336328 GLULP15104 373 aa19.14■□□□□ 0.65
CMTM1-204ENST00000336328 TFAMQ00059 246 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms