RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 KRT76Q01546 638 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 ZNF268Q14587 947 aaPredicted RBP13.05□□□□□ -0.32
VPS33B-201ENST00000333371 PKN2Q16513 984 aaKnown RBP13.05□□□□□ -0.32
VPS33B-201ENST00000333371 CCNG2Q16589 344 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 WDR44Q5JSH3 913 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 ANGEL2Q5VTE6 544 aaKnown RBP13.05□□□□□ -0.32
VPS33B-201ENST00000333371 NLRX1Q86UT6 975 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 NSMCE1Q8WV22 266 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 ATG4CQ96DT6 458 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 NTPCRQ9BSD7 190 aaKnown RBP13.05□□□□□ -0.32
VPS33B-201ENST00000333371 TACO1Q9BSH4 297 aaKnown RBP13.05□□□□□ -0.32
VPS33B-201ENST00000333371 EURLQ9NYK6 297 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 MAP3K20Q9NYL2 800 aaKnown RBP13.05□□□□□ -0.32
VPS33B-201ENST00000333371 ANKFY1Q9P2R3 1169 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 SAE1Q9UBE0 346 aaPredicted RBP13.05□□□□□ -0.32
VPS33B-201ENST00000333371 LTBP3Q9NS15 1303 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 EXOC1LA0A1B0GW35 172 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 CFAP73A6NFT4 308 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 RGS20O76081 388 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 C4BPAP04003 597 aaKnown RBP13.04□□□□□ -0.32
VPS33B-201ENST00000333371 SLC1A1P43005 524 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 BACE1P56817 501 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 ZACNQ401N2 412 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 ZNF394Q53GI3 561 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 TLDC1Q6P9B6 456 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 MFSD7Q6UXD7 560 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 APOBEC3FQ8IUX4 373 aaKnown RBP13.04□□□□□ -0.32
VPS33B-201ENST00000333371 SAMD3Q8N6K7 520 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 OR5B17Q8NGF7 314 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 ZNF526Q8TF50 670 aaPredicted RBP13.04□□□□□ -0.32
VPS33B-201ENST00000333371 MAML1Q92585 1016 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 TIPINQ9BVW5 301 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 PITPNM3Q9BZ71 974 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 LGALS13Q9UHV8 139 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 ZNF148Q9UQR1 794 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 NUB1Q9Y5A7 615 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 F8VP50 259 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 PECAM1P16284 738 aaPredicted RBP13.04□□□□□ -0.32
VPS33B-201ENST00000333371 SFNP31947 248 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 MCCD1P59942 119 aaPredicted RBP13.04□□□□□ -0.32
VPS33B-201ENST00000333371 PRKCEQ02156 737 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 RNASELQ05823 741 aaKnown RBP13.04□□□□□ -0.32
VPS33B-201ENST00000333371 CRELD2Q6UXH1 353 aaPredicted RBP13.04□□□□□ -0.32
VPS33B-201ENST00000333371 SYDE1Q6ZW31 735 aaPredicted RBP13.04□□□□□ -0.32
VPS33B-201ENST00000333371 ERICH1Q86X53 443 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 CCDC89Q8N998 374 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 ZNF280CQ8ND82 737 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 SPIRE2Q8WWL2 714 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 MAGEB18Q96M61 343 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 TMEM237Q96Q45 408 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 RXFP1Q9HBX9 757 aa13.04□□□□□ -0.32
VPS33B-201ENST00000333371 VWA5AO00534 786 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 NR3C2P08235 984 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 GBP2P32456 591 aaPredicted RBP13.03□□□□□ -0.32
VPS33B-201ENST00000333371 GTF2H1P32780 548 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 MAN1A1P33908 653 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 ARSEP51690 589 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 NOP14P78316 857 aaKnown RBP13.03□□□□□ -0.32
VPS33B-201ENST00000333371 ZNF252P-AS1Q0IIN9 211 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 PTP4A2Q12974 167 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 NFX1Q12986 1120 aaKnown RBP13.03□□□□□ -0.32
VPS33B-201ENST00000333371 CUL2Q13617 745 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 MTFR1Q15390 333 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 ARHGEF18Q6ZSZ5 1173 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 CCDC125Q86Z20 511 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 ANKMY2Q8IV38 441 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 RBBP8NLQ8NC74 664 aaPredicted RBP13.03□□□□□ -0.32
VPS33B-201ENST00000333371 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.03□□□□□ -0.32
VPS33B-201ENST00000333371 MAIP1Q8WWC4 291 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 C12orf65Q9H3J6 166 aaKnown RBP13.03□□□□□ -0.32
VPS33B-201ENST00000333371 ATP6V0A4Q9HBG4 840 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 KIAA1586Q9HCI6 787 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 RNF146Q9NTX7 359 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 IVNS1ABPQ9Y6Y0 642 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 A0A1W2PPM1 405 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 IFNB1P01574 187 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 FGFR1P11362 822 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 CLNS1AP54105 237 aaKnown RBP13.03□□□□□ -0.32
VPS33B-201ENST00000333371 HMGCS2P54868 508 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 OGDHQ02218 1023 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 GHRHRQ02643 423 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 GPS1Q13098 491 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 USP37Q86T82 979 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 KATNAL2Q8IYT4 538 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 ABRAQ8N0Z2 381 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 SLC17A8Q8NDX2 589 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 MYLK2Q9H1R3 596 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 CYP26B1Q9NR63 512 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 KLHL14Q9P2G3 628 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 ARHGAP28Q9P2N2 729 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 AGO2Q9UKV8 859 aaKnown RBP13.03□□□□□ -0.32
VPS33B-201ENST00000333371 FAM47DPA6NHR8 397 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 TTLL13PA6NNM8 815 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 PSTPIP1O43586 416 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 LIASO43766 372 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 EXTL3O43909 919 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 DIAPH2O60879 1101 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 TCEA3O75764 348 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 KRT1P04264 644 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 MYBL1P10243 752 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms