RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 XKR3Q5GH77 459 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 STYK1Q6J9G0 422 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 ZNF677Q86XU0 584 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 MCUQ8NE86 351 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 AGR3Q8TD06 166 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 ZNF384Q8TF68 577 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 ALG3Q92685 438 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 FAM163AQ96GL9 167 aaPredicted RBP13.97□□□□□ -0.17
DDX54-201ENST00000306014 NEUROG2Q9H2A3 272 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 DLGAP2Q9P1A6 1054 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 ZC3H7BQ9UGR2 993 aaKnown RBP13.97□□□□□ -0.17
DDX54-201ENST00000306014 PCDHA3Q9Y5H8 950 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 BTNL10A8MVZ5 291 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 DCDC2CA8MYV0 355 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 BRD2P25440 801 aaKnown RBP13.97□□□□□ -0.17
DDX54-201ENST00000306014 SNRPFP62306 86 aaKnown RBP13.97□□□□□ -0.17
DDX54-201ENST00000306014 MTMR2Q13614 643 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 TKFCQ3LXA3 575 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 RABGAP1LQ5R372 815 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 FAM71DQ8N9W8 422 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 RNF149Q8NC42 400 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 PRCCQ92733 491 aaPredicted RBP13.97□□□□□ -0.17
DDX54-201ENST00000306014 LRRC4BQ9NT99 713 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 HEY2Q9UBP5 337 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 DPEP1P16444 411 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 CTCFP49711 727 aaPredicted RBP13.97□□□□□ -0.17
DDX54-201ENST00000306014 PPP3CAQ08209 521 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 DUPD1Q68J44 220 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 CEP120Q8N960 986 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 CCDC97Q96F63 343 aaPredicted RBP13.97□□□□□ -0.17
DDX54-201ENST00000306014 PRMT6Q96LA8 375 aaPredicted RBP13.97□□□□□ -0.17
DDX54-201ENST00000306014 TMEM121Q9BTD3 319 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 MOV10L1Q9BXT6 1211 aaKnown RBP13.97□□□□□ -0.17
DDX54-201ENST00000306014 TMEM39BQ9GZU3 492 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 EPS15L1Q9UBC2 864 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 IGSF9BQ9UPX0 1349 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 PABPN1LA6NDY0 278 aaKnown RBP13.97□□□□□ -0.17
DDX54-201ENST00000306014 H3BRJ5 948 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 MEIS2O14770 477 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 RGL2O15211 777 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 AUHQ13825 339 aaKnown RBP13.97□□□□□ -0.17
DDX54-201ENST00000306014 KCNT1Q5JUK3 1230 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 FGD4Q96M96 766 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 ZDHHC15Q96MV8 337 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 FAM111AQ96PZ2 611 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 WRNIP1Q96S55 665 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 SNX25Q9H3E2 840 aa13.97□□□□□ -0.17
DDX54-201ENST00000306014 DHX35Q9H5Z1 703 aaKnown RBP13.97□□□□□ -0.17
DDX54-201ENST00000306014 SNX3O60493 162 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 DNAJC8O75937 253 aaPredicted RBP13.96□□□□□ -0.17
DDX54-201ENST00000306014 PROSCO94903 275 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 SOX10P56693 466 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 CUL2Q13617 745 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 KAT2BQ92831 832 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 GGA2Q9UJY4 613 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 FAF1Q9UNN5 650 aaPredicted RBP13.96□□□□□ -0.17
DDX54-201ENST00000306014 SRRM3A6NNA2 597 aaPredicted RBP13.96□□□□□ -0.17
DDX54-201ENST00000306014 PSTPIP1O43586 416 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 EXTL3O43909 919 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 GRAP2O75791 330 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 ITKQ08881 620 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 EMC2Q15006 297 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 HEATR6Q6AI08 1181 aaKnown RBP13.96□□□□□ -0.17
DDX54-201ENST00000306014 C1orf186Q6ZWK4 172 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 ATXN7L3BQ96GX2 97 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 TMEM237Q96Q45 408 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 SERPINI1Q99574 410 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 LRRC4Q9HBW1 653 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 ANKEF1Q9NU02 776 aa13.96□□□□□ -0.17
DDX54-201ENST00000306014 KCNA3P22001 575 aa13.96□□□□□ -0.18
DDX54-201ENST00000306014 OSBPP22059 807 aa13.96□□□□□ -0.18
DDX54-201ENST00000306014 CCNG2Q16589 344 aa13.96□□□□□ -0.18
DDX54-201ENST00000306014 PCNX4Q63HM2 1172 aa13.96□□□□□ -0.18
DDX54-201ENST00000306014 MTDHQ86UE4 582 aaKnown RBP13.96□□□□□ -0.18
DDX54-201ENST00000306014 PCMTD2Q9NV79 361 aa13.96□□□□□ -0.18
DDX54-201ENST00000306014 NINJ2Q9NZG7 142 aa13.96□□□□□ -0.18
DDX54-201ENST00000306014 PDGFRAP16234 1089 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 TYK2P29597 1187 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 CDC25CP30307 473 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 RARRES1P49788 294 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 RCN1Q15293 331 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 CNGA2Q16280 664 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 TAF1BQ53T94 588 aaPredicted RBP13.95□□□□□ -0.18
DDX54-201ENST00000306014 ARID3BQ8IVW6 561 aaPredicted RBP13.95□□□□□ -0.18
DDX54-201ENST00000306014 PPIL6Q8IXY8 311 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 RNF169Q8NCN4 708 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 ZNF526Q8TF50 670 aaPredicted RBP13.95□□□□□ -0.18
DDX54-201ENST00000306014 ATXN2LQ8WWM7 1075 aaKnown RBP13.95□□□□□ -0.18
DDX54-201ENST00000306014 NSL1Q96IY1 281 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 TRIM56Q9BRZ2 755 aaKnown RBP13.95□□□□□ -0.18
DDX54-201ENST00000306014 DCLK3Q9C098 648 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 PPCSQ9HAB8 311 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 ZNF70Q9UC06 446 aaPredicted RBP13.95□□□□□ -0.18
DDX54-201ENST00000306014 ZNRF3Q9ULT6 936 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 SESN2P58004 480 aaPredicted RBP13.95□□□□□ -0.18
DDX54-201ENST00000306014 KCNJ2P63252 427 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 HIC1Q14526 733 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 CLEC16AQ2KHT3 1053 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 SLC30A9Q6PML9 568 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 RASSF3Q86WH2 238 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms