RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 RFWD2Q8NHY2 731 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 PCDHGB4Q9UN71 923 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 C19orf81C9J6K1 198 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 TMEM62Q0P6H9 643 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 PTGISQ16647 500 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 TTC39BQ5VTQ0 682 aaPredicted RBP14.59□□□□□ -0.07
PRKCB-201ENST00000303531 DAGLBQ8NCG7 672 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 UBA3Q8TBC4 463 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 HNRNPLLQ8WVV9 542 aaKnown RBP14.59□□□□□ -0.07
PRKCB-201ENST00000303531 TSPAN17Q96FV3 270 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 C20orf96Q9NUD7 363 aaPredicted RBP14.59□□□□□ -0.07
PRKCB-201ENST00000303531 ABCE1P61221 599 aaKnown RBP14.59□□□□□ -0.07
PRKCB-201ENST00000303531 CYP4A22Q5TCH4 519 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 NIF3L1Q9GZT8 377 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 METTL5Q9NRN9 209 aaKnown RBP14.59□□□□□ -0.07
PRKCB-201ENST00000303531 PSD3Q9NYI0 1048 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 ARHGAP26Q9UNA1 814 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 MTO1Q9Y2Z2 717 aaKnown RBP14.59□□□□□ -0.07
PRKCB-201ENST00000303531 FAM107AO95990 144 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 RBP3P10745 1247 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 GPD1P21695 349 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 BRD2P25440 801 aaKnown RBP14.59□□□□□ -0.07
PRKCB-201ENST00000303531 NPEPPSP55786 919 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 PABPC5Q96DU9 382 aaKnown RBP14.59□□□□□ -0.07
PRKCB-201ENST00000303531 AGBL1Q96MI9 1066 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 MED21Q13503 144 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 ZC3H12BQ5HYM0 836 aaKnown RBP14.59□□□□□ -0.07
PRKCB-201ENST00000303531 AGPAT3Q9NRZ7 376 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 MAN1A2O60476 641 aa14.58□□□□□ -0.07
PRKCB-201ENST00000303531 VCPP55072 806 aaKnown RBP14.58□□□□□ -0.07
PRKCB-201ENST00000303531 CDC42EP1Q00587 391 aa14.58□□□□□ -0.07
PRKCB-201ENST00000303531 GRB10Q13322 594 aa14.58□□□□□ -0.07
PRKCB-201ENST00000303531 RIBC1Q8N443 379 aaPredicted RBP14.58□□□□□ -0.07
PRKCB-201ENST00000303531 FAM71DQ8N9W8 422 aa14.58□□□□□ -0.07
PRKCB-201ENST00000303531 MDM1Q8TC05 714 aa14.58□□□□□ -0.07
PRKCB-201ENST00000303531 KRT35Q92764 455 aa14.58□□□□□ -0.07
PRKCB-201ENST00000303531 DNAJC7Q99615 494 aa14.58□□□□□ -0.07
PRKCB-201ENST00000303531 KDM4CQ9H3R0 1056 aa14.58□□□□□ -0.07
PRKCB-201ENST00000303531 PLAGL2Q9UPG8 496 aa14.58□□□□□ -0.07
PRKCB-201ENST00000303531 CCT8L1PA6NM43 557 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 ZSCAN9O15535 394 aaPredicted RBP14.58□□□□□ -0.08
PRKCB-201ENST00000303531 LRRC71Q8N4P6 559 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 RBM46Q8TBY0 533 aaKnown RBP14.58□□□□□ -0.08
PRKCB-201ENST00000303531 CASKIN2Q8WXE0 1202 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 KCNK16Q96T55 309 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 ADNPQ9H2P0 1102 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 CNOT7Q9UIV1 285 aaKnown RBP14.58□□□□□ -0.08
PRKCB-201ENST00000303531 ZNF197O14709 1029 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 SPRP35270 261 aaPredicted RBP14.58□□□□□ -0.08
PRKCB-201ENST00000303531 TRIM45Q9H8W5 580 aaPredicted RBP14.58□□□□□ -0.08
PRKCB-201ENST00000303531 hCG_2014768A0A024R1R8 64 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 AKAP10O43572 662 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 RUSC1Q9BVN2 902 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 PRPF4O43172 522 aaKnown RBP eCLIP14.58□□□□□ -0.08
PRKCB-201ENST00000303531 ATXN3P54252 364 aaPredicted RBP14.58□□□□□ -0.08
PRKCB-201ENST00000303531 PCSK7Q16549 785 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 KCTD17Q8N5Z5 321 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 MANSC1Q9H8J5 431 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 GPR75-ASB3A0A0A6YYF3 556 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 AIM2O14862 343 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 POLBP06746 335 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 HMBSP08397 361 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 C16orf89Q6UX73 402 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 PPIL6Q8IXY8 311 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 TAGAPQ8N103 731 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 FAM151AQ8WW52 585 aa14.58□□□□□ -0.08
PRKCB-201ENST00000303531 B2RBV5 119 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 MSH4O15457 936 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 CTSHP09668 335 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 GOLGA7BQ2TAP0 167 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 ACSF2Q96CM8 615 aaPredicted RBP14.57□□□□□ -0.08
PRKCB-201ENST00000303531 CARD9Q9H257 536 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 IQSEC2Q5JU85 1478 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 GTPBP10A4D1E9 387 aaKnown RBP14.57□□□□□ -0.08
PRKCB-201ENST00000303531 KLHL2O95198 593 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 SYF2O95926 243 aaKnown RBP14.57□□□□□ -0.08
PRKCB-201ENST00000303531 PDK1Q15118 436 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 C6orf10Q5SRN2 563 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 SLC13A5Q86YT5 568 aaPredicted RBP14.57□□□□□ -0.08
PRKCB-201ENST00000303531 SLC7A14Q8TBB6 771 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 NAGPAQ9UK23 515 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 A0A087X0T9 212 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 SMAPO00193 183 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 MAGEB2O15479 319 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 TRAPPC3O43617 180 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 GH1P01241 217 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 FAM228BP0C875 321 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.57□□□□□ -0.088e-10■□□□□ 11.1
PRKCB-201ENST00000303531 CDYLQ9Y232 598 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 ZC3H4Q9UPT8 1303 aaKnown RBP14.57□□□□□ -0.08
PRKCB-201ENST00000303531 DYNC1LI2O43237 492 aaPredicted RBP14.57□□□□□ -0.08
PRKCB-201ENST00000303531 PON1P27169 355 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 ATICP31939 592 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 TBX20Q9UMR3 447 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 CD4P01730 458 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 KIZQ2M2Z5 673 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 SPDYAQ5MJ70 313 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 MFN1Q8IWA4 741 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 EME1Q96AY2 570 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 DCUN1D1Q96GG9 259 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms