RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 GPAT2Q6NUI2 795 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 TRIM50Q86XT4 487 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 EXOC8Q8IYI6 725 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 RCOR2Q8IZ40 523 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 HAUS1Q96CS2 278 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 EPB41L4BQ9H329 900 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 NKIRAS1Q9NYS0 192 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 TGFB3P10600 412 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 DRP2Q13474 957 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 AUHQ13825 339 aaKnown RBP14.42□□□□□ -0.1
CDH8-201ENST00000299345 QPCTQ16769 361 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 CDR2LQ86X02 465 aaPredicted RBP14.42□□□□□ -0.1
CDH8-201ENST00000299345 C9orf72Q96LT7 481 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 HAPLN2Q9GZV7 340 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 C2orf40Q9H1Z8 148 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 CISHQ9NSE2 258 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 ZNF646O15015 1829 aaPredicted RBP14.42□□□□□ -0.1
CDH8-201ENST00000299345 MAFO75444 373 aaPredicted RBP14.42□□□□□ -0.1
CDH8-201ENST00000299345 ATG7O95352 703 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 TTC4O95801 387 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 CST3P01034 146 aaPredicted RBP14.42□□□□□ -0.1
CDH8-201ENST00000299345 CHKAP35790 457 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 MNAT1P51948 309 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 LAMTOR4Q0VGL1 99 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 LRRC14Q15048 493 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 RIOX2Q8IUF8 465 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 KATNAL2Q8IYT4 538 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 CENPTQ96BT3 561 aa14.42□□□□□ -0.1
CDH8-201ENST00000299345 ELAC2Q9BQ52 826 aaKnown RBP14.42□□□□□ -0.1
CDH8-201ENST00000299345 O00370 1275 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 PAEPP09466 180 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 MMP13P45452 471 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 IGBP1P78318 339 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 SLC20A2Q08357 652 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 PLEKHA7Q6IQ23 1121 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 YTHDF3Q7Z739 585 aaKnown RBP14.41□□□□□ -0.1
CDH8-201ENST00000299345 PAIP2Q9BPZ3 127 aaKnown RBP14.41□□□□□ -0.1
CDH8-201ENST00000299345 MAF1Q9H063 256 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 BTBD7Q9P203 1132 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 GGA2Q9UJY4 613 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 CD2APQ9Y5K6 639 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 PGK2P07205 417 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 RPL7AP62424 266 aaKnown RBP14.41□□□□□ -0.1
CDH8-201ENST00000299345 ADCY1Q08828 1119 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 P3H1Q32P28 736 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 ATP13A4Q4VNC1 1196 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.41□□□□□ -0.1
CDH8-201ENST00000299345 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.41□□□□□ -0.1
CDH8-201ENST00000299345 CNKSR2Q8WXI2 1034 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 SLCO2A1Q92959 643 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 SPATA33Q96N06 139 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 SERPINB12Q96P63 405 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 ELP3Q9H9T3 547 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 ASS1P00966 412 aaKnown RBP14.41□□□□□ -0.1
CDH8-201ENST00000299345 CCDC13Q8IYE1 715 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 CCHCR1Q8TD31 782 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 ACTR5Q9H9F9 607 aaPredicted RBP14.41□□□□□ -0.1
CDH8-201ENST00000299345 MLXIPLQ9NP71 852 aa14.41□□□□□ -0.1
CDH8-201ENST00000299345 PTP4A2Q12974 167 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 ACSF2Q96CM8 615 aaPredicted RBP14.4□□□□□ -0.1
CDH8-201ENST00000299345 TMEM109Q9BVC6 243 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 RPF1Q9H9Y2 349 aaKnown RBP14.4□□□□□ -0.1
CDH8-201ENST00000299345 TMEM51Q9NW97 253 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 SOWAHBA6NEL2 793 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 SGK1O00141 431 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 USP2O75604 605 aaPredicted RBP14.4□□□□□ -0.1
CDH8-201ENST00000299345 BRAFP15056 766 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 MMP8P22894 467 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 STX2P32856 288 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 IREB2P48200 963 aaKnown RBP14.4□□□□□ -0.1
CDH8-201ENST00000299345 MCCD1P59942 119 aaPredicted RBP14.4□□□□□ -0.1
CDH8-201ENST00000299345 DYNLT1P63172 113 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 ZNF667Q5HYK9 610 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 CYP4A22Q5TCH4 519 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 CAPN12Q6ZSI9 719 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 LRRC34Q8IZ02 419 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 MRRFQ96E11 262 aaKnown RBP14.4□□□□□ -0.1
CDH8-201ENST00000299345 PWWP2AQ96N64 755 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 RBM15Q96T37 977 aaKnown RBP eCLIP14.4□□□□□ -0.11e-7■■□□□ 14.3
CDH8-201ENST00000299345 SAYSD1Q9NPB0 183 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 PSME4Q14997 1843 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 CNTNAP2Q9UHC6 1331 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 PSMA2P25787 234 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 ARSEP51690 589 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 HADHQ16836 314 aaKnown RBP14.4□□□□□ -0.1
CDH8-201ENST00000299345 NOL9Q5SY16 702 aaKnown RBP14.4□□□□□ -0.1
CDH8-201ENST00000299345 UBAP2Q5T6F2 1119 aaKnown RBP14.4□□□□□ -0.1
CDH8-201ENST00000299345 HERPUD2Q9BSE4 406 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 VPS37BQ9H9H4 285 aa14.4□□□□□ -0.1
CDH8-201ENST00000299345 RGS17Q9UGC6 210 aaPredicted RBP14.4□□□□□ -0.1
CDH8-201ENST00000299345 ATXN2Q99700 1313 aaKnown RBP14.39□□□□□ -0.11
CDH8-201ENST00000299345 TMEM120BA0PK00 339 aa14.39□□□□□ -0.11
CDH8-201ENST00000299345 LSM8O95777 96 aaKnown RBP14.39□□□□□ -0.11
CDH8-201ENST00000299345 DRD4P21917 467 aa14.39□□□□□ -0.11
CDH8-201ENST00000299345 GPS1Q13098 491 aa14.39□□□□□ -0.11
CDH8-201ENST00000299345 PIGHQ14442 188 aaPredicted RBP14.39□□□□□ -0.11
CDH8-201ENST00000299345 ATF7IP2Q5U623 682 aa14.39□□□□□ -0.11
CDH8-201ENST00000299345 SRRM1Q8IYB3 904 aaKnown RBP14.39□□□□□ -0.11
CDH8-201ENST00000299345 ZWILCHQ9H900 591 aa14.39□□□□□ -0.11
CDH8-201ENST00000299345 STRIP2Q9ULQ0 834 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms