RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 RPL21P46778 160 aaKnown RBP13.21□□□□□ -0.3
SLC6A1-201ENST00000287766 RARRES1P49788 294 aa13.21□□□□□ -0.3
SLC6A1-201ENST00000287766 FOXD4Q12950 439 aaPredicted RBP13.21□□□□□ -0.3
SLC6A1-201ENST00000287766 DALRD3Q5D0E6 543 aaKnown RBP13.21□□□□□ -0.3
SLC6A1-201ENST00000287766 USP6NLQ92738 828 aa13.21□□□□□ -0.3
SLC6A1-201ENST00000287766 SLC5A5Q92911 643 aa13.21□□□□□ -0.3
SLC6A1-201ENST00000287766 SLC13A1Q9BZW2 595 aa13.21□□□□□ -0.3
SLC6A1-201ENST00000287766 CCDC68Q9H2F9 335 aa13.21□□□□□ -0.3
SLC6A1-201ENST00000287766 CHMP2BQ9UQN3 213 aa13.21□□□□□ -0.3
SLC6A1-201ENST00000287766 L3MBTL1Q9Y468 752 aa13.21□□□□□ -0.3
SLC6A1-201ENST00000287766 ARFGEF2Q9Y6D5 1785 aa13.21□□□□□ -0.3
SLC6A1-201ENST00000287766 NID2Q14112 1375 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 BAZ2AQ9UIF9 1905 aaKnown RBP13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 ATP6V1B1P15313 513 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 CIITAP33076 1130 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 CAP2P40123 477 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 MED10Q9BTT4 135 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 ING2Q9H160 280 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 KCND2Q9NZV8 630 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 GTF3C4Q9UKN8 822 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 PCDHB2Q9Y5E7 798 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 IQANK1A0A1B0GTG1 560 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 SHBGP04278 402 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 GARSP41250 739 aaKnown RBP13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 ARL4CP56559 192 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 C1orf186Q6ZWK4 172 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 CCDC125Q86Z20 511 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 TRABDQ9H4I3 376 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 KIAA1586Q9HCI6 787 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 C5P01031 1676 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 AGPSO00116 658 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 TGFB1I1O43294 461 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 GGPS1O95749 300 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 PPATQ06203 517 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 DNAJC3Q13217 504 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 TFDP1Q14186 410 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 KCNT1Q5JUK3 1230 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 DACT2Q5SW24 774 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 PSPC1Q8WXF1 523 aaKnown RBP13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 ZNRF3Q9ULT6 936 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 NEU2Q9Y3R4 380 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 M0QYV0 167 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 KRT37O76014 449 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 SEC24DO94855 1032 aaPredicted RBP13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 GTF2H1P32780 548 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 PAPOLAP51003 745 aaKnown RBP13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 PTENP60484 403 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 OCRLQ01968 901 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 NOP9Q86U38 636 aaKnown RBP13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 ETNPPLQ8TBG4 499 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 MOV10L1Q9BXT6 1211 aaKnown RBP13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 ASCC2Q9H1I8 757 aaPredicted RBP13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 CDC42EP4Q9H3Q1 356 aaKnown RBP13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 ACAD9Q9H845 621 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 IP6K2Q9UHH9 426 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 DDX20Q9UHI6 824 aaKnown RBP13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 PPME1Q9Y570 386 aa13.2□□□□□ -0.3
SLC6A1-201ENST00000287766 SCTRP47872 440 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 MRPS15P82914 257 aaKnown RBP13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 EMC2Q15006 297 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 FAM102AQ5T9C2 384 aaPredicted RBP13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 MICALL2Q8IY33 904 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 PARVAQ9NVD7 372 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 PIM2Q9P1W9 311 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 ICAM1P05362 532 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 RARAP10276 462 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 ITIH2P19823 946 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 ACBD5Q5T8D3 534 aaPredicted RBP13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 ACAD10Q6JQN1 1059 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 PALB2Q86YC2 1186 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 GMCL1P1Q8NEA9 526 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 CHD2O14647 1828 aaKnown RBP13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 ENO1P06733 434 aaKnown RBP13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 RGS7P49802 495 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 PRAMEP78395 509 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 GABPAQ06546 454 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 CYLC2Q14093 348 aaPredicted RBP13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 TRIP10Q15642 601 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 CNGA3Q16281 694 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 DNAAF3Q8N9W5 541 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 C1orf131Q8NDD1 294 aaKnown RBP13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 GRAMD1AQ96CP6 724 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 HAUS8Q9BT25 410 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 SPC25Q9HBM1 224 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 NPHS2Q9NP85 383 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 ZNF229Q9UJW7 825 aa13.19□□□□□ -0.3
SLC6A1-201ENST00000287766 CDH16O75309 829 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 CALB1P05937 261 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 MAGEA4P43358 317 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 STAT5BP51692 787 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 TMTC4Q5T4D3 741 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 AGGF1Q8N302 714 aaeCLIP13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 OR6B3Q8NGW1 331 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 IL31RAQ8NI17 732 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 CHCHD3Q9NX63 227 aaKnown RBP13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 ZFATQ9P243 1243 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 ANKRD63C9JTQ0 380 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms