RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 P4HA2O15460 535 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 AHCYL1O43865 530 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 DIAPH2O60879 1101 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 UNC5CO95185 931 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 FOSP01100 380 aaPredicted RBP10.97□□□□□ -0.65
UPF3B-201ENST00000276201 GH1P01241 217 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 KRT16P08779 473 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 ITIH2P19823 946 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 MUTP22033 750 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 UBA1P22314 1058 aaKnown RBP10.97□□□□□ -0.65
UPF3B-201ENST00000276201 CCNHP51946 323 aaPredicted RBP10.97□□□□□ -0.65
UPF3B-201ENST00000276201 SP2Q02086 613 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 SIX1Q15475 284 aaPredicted RBP10.97□□□□□ -0.65
UPF3B-201ENST00000276201 SGSM1Q2NKQ1 1148 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 TTC27Q6P3X3 843 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 SLC9A9Q8IVB4 645 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 GLYCTKQ8IVS8 523 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 C7orf61Q8IZ16 206 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 RIBC1Q8N443 379 aaPredicted RBP10.97□□□□□ -0.65
UPF3B-201ENST00000276201 ENDOVQ8N8Q3 282 aaKnown RBP10.97□□□□□ -0.65
UPF3B-201ENST00000276201 REEP2Q9BRK0 252 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 EHMT1Q9H9B1 1298 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 SEL1LQ9UBV2 794 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 APEX2Q9UBZ4 518 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 COG5Q9UP83 839 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 A6NJR5 290 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 SPATA31C2B4DYI2 1134 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 TCP11X1B4DZS4 312 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 PMM2O15305 246 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 TGFB1I1O43294 461 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 FESP07332 822 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 SPATA31C1P0DKV0 1188 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 GZMAP12544 262 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 ITGB5P18084 799 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 ICAM3P32942 547 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 GCKP35557 465 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 SREBF1P36956 1147 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 CPT1AP50416 773 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 RTP1P59025 263 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 CTTNQ14247 550 aaKnown RBP10.96□□□□□ -0.65
UPF3B-201ENST00000276201 LBRQ14739 615 aaKnown RBP10.96□□□□□ -0.65
UPF3B-201ENST00000276201 DCAF17Q5H9S7 520 aaPredicted RBP10.96□□□□□ -0.65
UPF3B-201ENST00000276201 ANKRD20A2Q5SQ80 823 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 ANKRD20A1Q5TYW2 823 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 ANKRD20A3Q5VUR7 823 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 CCDC137Q6PK04 289 aaKnown RBP10.96□□□□□ -0.65
UPF3B-201ENST00000276201 CXCL17Q6UXB2 119 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 PPP1R21Q6ZMI0 780 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 CEP128Q6ZU80 1094 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 SLC13A5Q86YT5 568 aaPredicted RBP10.96□□□□□ -0.65
UPF3B-201ENST00000276201 FAM186BQ8IYM0 893 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 MAIP1Q8WWC4 291 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 ARHGEF2Q92974 986 aaKnown RBP10.96□□□□□ -0.65
UPF3B-201ENST00000276201 C18orf8Q96DM3 657 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 SPDL1Q96EA4 605 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 AGPAT1Q99943 283 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 FOXP3Q9BZS1 431 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 FGFR1OP2Q9NVK5 253 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 UBIAD1Q9Y5Z9 338 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 ZMYM2Q9UBW7 1377 aa10.96□□□□□ -0.65
UPF3B-201ENST00000276201 MYH11P35749 1972 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 DNAH12Q6ZR08 3092 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 TMEM120BA0PK00 339 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 TRAFD1O14545 582 aaPredicted RBP10.96□□□□□ -0.66
UPF3B-201ENST00000276201 GPC5P78333 572 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 PRPF4BQ13523 1007 aaKnown RBP10.96□□□□□ -0.66
UPF3B-201ENST00000276201 GNPTABQ3T906 1256 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 TRIM60Q495X7 471 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 WASHC2DQ5SRD0 308 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 ARHGEF18Q6ZSZ5 1173 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 CATSPER3Q86XQ3 398 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 FBF1Q8TES7 1133 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 AFG1LQ8WV93 481 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 EMID1Q96A84 441 aaPredicted RBP10.96□□□□□ -0.66
UPF3B-201ENST00000276201 INTS2Q9H0H0 1204 aaKnown RBP10.96□□□□□ -0.66
UPF3B-201ENST00000276201 BCAS3Q9H6U6 928 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 STARD7Q9NQZ5 370 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 ZFATQ9P243 1243 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 KLHL14Q9P2G3 628 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 STARD13Q9Y3M8 1113 aa10.96□□□□□ -0.66
UPF3B-201ENST00000276201 SORBS3O60504 671 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 HNRNPCL1O60812 293 aaKnown RBP10.95□□□□□ -0.66
UPF3B-201ENST00000276201 TGFB3P10600 412 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 KRT13P13646 458 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 CIITAP33076 1130 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 CASP4P49662 377 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 YARSP54577 528 aaKnown RBP10.95□□□□□ -0.66
UPF3B-201ENST00000276201 MRPS35P82673 323 aaKnown RBP10.95□□□□□ -0.66
UPF3B-201ENST00000276201 PURAQ00577 322 aaKnown RBP10.95□□□□□ -0.66
UPF3B-201ENST00000276201 STRN3Q13033 797 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 NR1H3Q13133 447 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 CELF3Q5SZQ8 465 aaKnown RBP10.95□□□□□ -0.66
UPF3B-201ENST00000276201 C1orf53Q5VUE5 145 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 NAIF1Q69YI7 327 aaPredicted RBP10.95□□□□□ -0.66
UPF3B-201ENST00000276201 ERICH1Q86X53 443 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 FITM2Q8N6M3 262 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 DYDC1Q8WWB3 177 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 NAF1Q96HR8 494 aaKnown RBP10.95□□□□□ -0.66
UPF3B-201ENST00000276201 GLT1D1Q96MS3 346 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 THAP2Q9H0W7 228 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms