RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 MTM1Q13496 603 aa11.65□□□□□ -0.54
CHFR-201ENST00000266880 ARL6IP4Q66PJ3 421 aaKnown RBP11.65□□□□□ -0.54
CHFR-201ENST00000266880 SCARA3Q6AZY7 606 aa11.65□□□□□ -0.54
CHFR-201ENST00000266880 SPATA16Q9BXB7 569 aa11.65□□□□□ -0.54
CHFR-201ENST00000266880 ATP6V1B2P21281 511 aa11.65□□□□□ -0.54
CHFR-201ENST00000266880 IZUMO1Q8IYV9 350 aa11.65□□□□□ -0.54
CHFR-201ENST00000266880 RAB42Q8N4Z0 105 aa11.65□□□□□ -0.54
CHFR-201ENST00000266880 PRCCQ92733 491 aaPredicted RBP11.65□□□□□ -0.54
CHFR-201ENST00000266880 AKT1P31749 480 aa11.65□□□□□ -0.54
CHFR-201ENST00000266880 ZNF200P98182 395 aaPredicted RBP11.65□□□□□ -0.54
CHFR-201ENST00000266880 MMRN1Q13201 1228 aa11.65□□□□□ -0.54
CHFR-201ENST00000266880 IZUMO2Q6UXV1 221 aa11.65□□□□□ -0.54
CHFR-201ENST00000266880 LRRC31Q6UY01 552 aa11.65□□□□□ -0.54
CHFR-201ENST00000266880 GDPD5Q8WTR4 605 aa11.65□□□□□ -0.54
CHFR-201ENST00000266880 C9orf72Q96LT7 481 aa11.65□□□□□ -0.54
CHFR-201ENST00000266880 YEATS2Q9ULM3 1422 aa11.65□□□□□ -0.54
CHFR-201ENST00000266880 SLC10A5Q5PT55 438 aa11.65□□□□□ -0.55
CHFR-201ENST00000266880 FRMD6Q96NE9 622 aa11.65□□□□□ -0.55
CHFR-201ENST00000266880 UBXN6Q9BZV1 441 aa11.65□□□□□ -0.55
CHFR-201ENST00000266880 CLDN3O15551 220 aa11.65□□□□□ -0.55
CHFR-201ENST00000266880 IRAK1P51617 712 aa11.65□□□□□ -0.55
CHFR-201ENST00000266880 RALGDSQ12967 914 aa11.65□□□□□ -0.55
CHFR-201ENST00000266880 SAC3D1A6NKF1 404 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 TRIM64CA6NLI5 447 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.64□□□□□ -0.55
CHFR-201ENST00000266880 LARGE1O95461 756 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 PGK2P07205 417 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 PSMA3P25788 255 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 OVGP1Q12889 678 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 TTC39BQ5VTQ0 682 aaPredicted RBP11.64□□□□□ -0.55
CHFR-201ENST00000266880 LGR6Q9HBX8 967 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 RAD18Q9NS91 495 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 BLMP54132 1417 aaPredicted RBP11.64□□□□□ -0.55
CHFR-201ENST00000266880 MAPKBP1O60336 1514 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 NR5A2O00482 541 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 ABATP80404 500 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 EPHX4Q8IUS5 362 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 RNASE11Q8TAA1 199 aaKnown RBP11.64□□□□□ -0.55
CHFR-201ENST00000266880 FAM118BQ9BPY3 351 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 EPS8L2Q9H6S3 715 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 ZNF682O95780 498 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 USP10Q14694 798 aaKnown RBP11.64□□□□□ -0.55
CHFR-201ENST00000266880 LRRC71Q8N4P6 559 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 ECSITQ9BQ95 431 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 MOV10L1Q9BXT6 1211 aaKnown RBP11.64□□□□□ -0.55
CHFR-201ENST00000266880 ATPIF1Q9UII2 106 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 PNMA8BQ9ULN7 279 aaPredicted RBP11.64□□□□□ -0.55
CHFR-201ENST00000266880 A0A1W2PRG6 482 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 ZNF284Q2VY69 593 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 SYDE1Q6ZW31 735 aaPredicted RBP11.64□□□□□ -0.55
CHFR-201ENST00000266880 UNC13DQ70J99 1090 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 INTS13Q9NVM9 706 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 ZNF197O14709 1029 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 MOCS2O96007 188 aaPredicted RBP11.64□□□□□ -0.55
CHFR-201ENST00000266880 CCNIQ14094 377 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 LLGL2Q6P1M3 1020 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 TTC23LQ6PF05 361 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 THNSL1Q8IYQ7 743 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 WDR36Q8NI36 951 aaKnown RBP11.64□□□□□ -0.55
CHFR-201ENST00000266880 ATP8B4Q8TF62 1192 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 ENTPD7Q9NQZ7 604 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 EURLQ9NYK6 297 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 SMIM31A0A1B0GVY4 71 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 TRIM49D1C9J1S8 452 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 ATP6V1G1O75348 118 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 FAM83BQ5T0W9 1011 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 ZBTB38Q8NAP3 1195 aaPredicted RBP11.64□□□□□ -0.55
CHFR-201ENST00000266880 RDM1Q8NG50 284 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 JADE3Q92613 823 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 SIK2Q9H0K1 926 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 SPASTQ9UBP0 616 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 ADRM1Q16186 407 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 KRT74Q7RTS7 529 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 TUFT1Q9NNX1 390 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 AVENQ9NQS1 362 aaPredicted RBP11.64□□□□□ -0.55
CHFR-201ENST00000266880 RBM12Q9NTZ6 932 aaKnown RBP11.64□□□□□ -0.55
CHFR-201ENST00000266880 FYNP06241 537 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 GSSP48637 474 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 KCTD2Q14681 263 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 PGBD2Q6P3X8 592 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 LRRC34Q8IZ02 419 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 CDHR1Q96JP9 859 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 SYNDIG1Q9H7V2 258 aa11.64□□□□□ -0.55
CHFR-201ENST00000266880 MEI4A8MW99 385 aa11.63□□□□□ -0.55
CHFR-201ENST00000266880 PIK3R1P27986 724 aa11.63□□□□□ -0.55
CHFR-201ENST00000266880 POLD3Q15054 466 aaPredicted RBP11.63□□□□□ -0.55
CHFR-201ENST00000266880 KLHL3Q9UH77 587 aa11.63□□□□□ -0.55
CHFR-201ENST00000266880 IFT140Q96RY7 1462 aa11.63□□□□□ -0.55
CHFR-201ENST00000266880 CYP2D7A0A087X1C5 515 aa11.63□□□□□ -0.55
CHFR-201ENST00000266880 FAM20BO75063 409 aa11.63□□□□□ -0.55
CHFR-201ENST00000266880 RRM2P31350 389 aa11.63□□□□□ -0.55
CHFR-201ENST00000266880 MAPKAPK2P49137 400 aa11.63□□□□□ -0.55
CHFR-201ENST00000266880 PPIDQ08752 370 aaKnown RBP11.63□□□□□ -0.55
CHFR-201ENST00000266880 TAB1Q15750 504 aa11.63□□□□□ -0.55
CHFR-201ENST00000266880 MTHFD1LQ6UB35 978 aa11.63□□□□□ -0.55
CHFR-201ENST00000266880 FAM213AQ9BRX8 229 aa11.63□□□□□ -0.55
CHFR-201ENST00000266880 PSD3Q9NYI0 1048 aa11.63□□□□□ -0.55
CHFR-201ENST00000266880 SNX12Q9UMY4 172 aa11.63□□□□□ -0.55
CHFR-201ENST00000266880 PHKA1P46020 1223 aa11.63□□□□□ -0.55
CHFR-201ENST00000266880 SRP54P61011 504 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms