RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 MCF2L2Q86YR7 1114 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 SCG3Q8WXD2 468 aaKnown RBP17.99■□□□□ 0.47
SRF-201ENST00000265354 NMD3Q96D46 503 aaKnown RBP17.99■□□□□ 0.47
SRF-201ENST00000265354 DNPEPQ9ULA0 475 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 C2orf71A6NGG8 1288 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 SOX11P35716 441 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 SESN2P58004 480 aaPredicted RBP17.98■□□□□ 0.47
SRF-201ENST00000265354 MED21Q13503 144 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 POU5F2Q8N7G0 328 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 RBBP8NLQ8NC74 664 aaPredicted RBP17.98■□□□□ 0.47
SRF-201ENST00000265354 LRRC4CQ9HCJ2 640 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 IP6K2Q9UHH9 426 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 GGA2Q9UJY4 613 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 AGO2Q9UKV8 859 aaKnown RBP17.98■□□□□ 0.47
SRF-201ENST00000265354 TRIM49D1C9J1S8 452 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 PPP1R11O60927 126 aaPredicted RBP17.98■□□□□ 0.47
SRF-201ENST00000265354 DGKIO75912 1065 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 KRT36O76013 467 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 HLA-DRAP01903 254 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 BMPR2Q13873 1038 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 TRIM50Q86XT4 487 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 FBXO36Q8NEA4 188 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 SENP7Q9BQF6 1050 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 PARVAQ9NVD7 372 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 USP21Q9UK80 565 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 C2CD2Q9Y426 696 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 PCDHB2Q9Y5E7 798 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 CSDE1O75534 798 aaKnown RBP17.98■□□□□ 0.47
SRF-201ENST00000265354 IZUMO2Q6UXV1 221 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 SULF1Q8IWU6 871 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 CDKL2Q92772 493 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 FBXO6Q9NRD1 293 aaPredicted RBP17.98■□□□□ 0.47
SRF-201ENST00000265354 WHRNQ9P202 907 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 PACSIN3Q9UKS6 424 aa17.98■□□□□ 0.47
SRF-201ENST00000265354 ZNF189O75820 626 aaPredicted RBP17.97■□□□□ 0.47
SRF-201ENST00000265354 ATP4AP20648 1035 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 HIC1Q14526 733 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 CHI3L2Q15782 390 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 NDUFAF2Q8N183 169 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 PAGR1Q9BTK6 254 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 O00370 1275 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 TBX3O15119 743 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 EIF3DO15371 548 aaKnown RBP eCLIP17.97■□□□□ 0.47
SRF-201ENST00000265354 NUDT17P0C025 328 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 RFX1P22670 979 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 SMARCA1P28370 1054 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 KRT80Q6KB66 452 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 LCA5Q86VQ0 697 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 GPD1LQ8N335 351 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 C1orf131Q8NDD1 294 aaKnown RBP17.97■□□□□ 0.47
SRF-201ENST00000265354 PCDHAC2Q9Y5I4 1007 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 MON2Q7Z3U7 1717 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 A0A1W2PPM1 405 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 CES2O00748 559 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 MGRN1O60291 552 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 KRT3P12035 628 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 GSCP56915 257 aaPredicted RBP17.97■□□□□ 0.47
SRF-201ENST00000265354 ARHGAP22Q7Z5H3 698 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 EMC1Q8N766 993 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 SPATA18Q8TC71 538 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 EPS8L1Q8TE68 723 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 ATXN2LQ8WWM7 1075 aaKnown RBP17.97■□□□□ 0.47
SRF-201ENST00000265354 HIC2Q96JB3 615 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 SENP1Q9P0U3 644 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 ZHX2Q9Y6X8 837 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 UBE4BO95155 1302 aa17.97■□□□□ 0.47
SRF-201ENST00000265354 NDC80O14777 642 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 KRT38O76015 456 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 USP4Q13107 963 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 ECHDC2Q86YB7 292 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 R3HDM2Q9Y2K5 976 aaKnown RBP17.96■□□□□ 0.47
SRF-201ENST00000265354 A6NJR5 290 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 HSPA4LO95757 839 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 ETS2P15036 469 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 GTF2H1P32780 548 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 ZBTB17Q13105 803 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 TMEM259Q4ZIN3 620 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 ZCWPW2Q504Y3 356 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 RNF220Q5VTB9 566 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 CENPTQ96BT3 561 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 PAFAH2Q99487 392 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 Q9H521 79 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 PCDHA3Q9Y5H8 950 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 KCNN4O15554 427 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 PYGBP11216 843 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 PTPN4P29074 926 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 MMP14P50281 582 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 GEMIN4P57678 1058 aaKnown RBP17.96■□□□□ 0.47
SRF-201ENST00000265354 ART3Q13508 389 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 FAM102AQ5T9C2 384 aaPredicted RBP17.96■□□□□ 0.47
SRF-201ENST00000265354 PTF1AQ7RTS3 328 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 LRRN4Q8WUT4 740 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 ZNF75CPQ92670 426 aaPredicted RBP17.96■□□□□ 0.47
SRF-201ENST00000265354 ADPGKQ9BRR6 497 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 TMEM120AQ9BXJ8 343 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 DCLK3Q9C098 648 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 MIS12Q9H081 205 aa17.96■□□□□ 0.47
SRF-201ENST00000265354 PIH1D1Q9NWS0 290 aaKnown RBP17.96■□□□□ 0.47
SRF-201ENST00000265354 TTC36A6NLP5 189 aa17.96■□□□□ 0.46
SRF-201ENST00000265354 AIM2O14862 343 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms