RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 NAPEPLDQ6IQ20 393 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 ZNF786Q8N393 782 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 EXD1Q8NHP7 514 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 ASZ1Q8WWH4 475 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 VCPKMTQ9H867 229 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 CCNB1IP1Q9NPC3 277 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 PNMA3Q9UL41 463 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 IPPQ9Y573 584 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 GON4LQ3T8J9 2241 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 SHANK2Q9UPX8 1470 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 PNMA6FA0A0J9YX94 578 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 KRT34O76011 436 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 FYNP06241 537 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 IRAK1P51617 712 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 KRT17Q04695 432 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 GSTA3Q16772 222 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 DDR2Q16832 855 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 HABP4Q5JVS0 413 aaKnown RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 RWDD4Q6NW29 188 aaKnown RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 LRRC6Q86X45 466 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 LARGE2Q8N3Y3 721 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 RBBP8NLQ8NC74 664 aaPredicted RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 RNASE11Q8TAA1 199 aaKnown RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 E2F7Q96AV8 911 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 MED15Q96RN5 788 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 WDR12Q9GZL7 423 aaKnown RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 MYRFQ9Y2G1 1151 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 SNX9Q9Y5X1 595 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 UBA6A0AVT1 1052 aaPredicted RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 OPLAHO14841 1288 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 FDFT1P37268 417 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 MTHFSDQ2M296 383 aaKnown RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 HECTD3Q5T447 861 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 THEMIS2Q5TEJ8 643 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 AGAP9Q5VTM2 703 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 ERO1BQ86YB8 467 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 PTPRN2Q92932 1015 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 EXT2Q93063 718 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 PHACTR1Q9C0D0 580 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 ISCUQ9H1K1 167 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 ALDH8A1Q9H2A2 487 aaPredicted RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 TRIM39Q9HCM9 518 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 ARHGEF38Q9NXL2 777 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 SAP30BPQ9UHR5 308 aaKnown RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 SYNJ2BP-COX16A0A087WUM0 186 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 PDXKO00764 312 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 TLR2O60603 784 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 BAIAP3O94812 1187 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 SEC24DO94855 1032 aaPredicted RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 FGAP02671 866 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 RALAP11233 206 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 ALAS1P13196 640 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 CPA1P15085 419 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 NQO1P15559 274 aaKnown RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 CHN1P15882 459 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 PLCG1P19174 1290 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 MAPK11Q15759 364 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 MAPK6Q16659 721 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 KCNT1Q5JUK3 1230 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 ZNF618Q5T7W0 954 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 KCNV1Q6PIU1 500 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 KLHL24Q6TFL4 600 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 C11orf57Q6ZUT1 292 aaPredicted RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 SCUBE1Q8IWY4 988 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 TIMMDC1Q9NPL8 285 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 COX16Q9P0S2 106 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 PALD1Q9ULE6 856 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 AKT3Q9Y243 479 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 IRAK3Q9Y616 596 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 F8W810 466 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 NEMP1O14524 444 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 TRAPPC3O43617 180 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 RBP1P09455 135 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 SLC2A3P11169 496 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 PABPC1P11940 636 aaKnown RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 ENO3P13929 434 aaPredicted RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 PRLRP16471 622 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 ZNF18P17022 549 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 PTPN4P29074 926 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 ACADSBP45954 432 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 TIMM10P62072 90 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 CYP27A1Q02318 531 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 PLOD1Q02809 727 aaPredicted RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 SCRN3Q0VDG4 424 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 SLC18A3Q16572 532 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 PTGISQ16647 500 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 RFX4Q33E94 735 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 ESRP1Q6NXG1 681 aaKnown RBP5.69□□□□□ -1.5
XRN1-201ENST00000264951 HPS1Q92902 700 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 BHMT2Q9H2M3 363 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 WDR41Q9HAD4 459 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 POLG2Q9UHN1 485 aa5.69□□□□□ -1.5
XRN1-201ENST00000264951 A0A1W2PQJ5 194 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 PI4K2BG5E9Z4 385 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 PCCAP05165 728 aaPredicted RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 CCDC130P13994 396 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 SARSP49591 514 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 ACLYP53396 1101 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 ALDH18A1P54886 795 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 ROR2Q01974 943 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms