RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 KYNUQ16719 465 aa18.83■□□□□ 0.6
COL5A3-201ENST00000264828 YIPF2Q9BWQ6 316 aa18.83■□□□□ 0.6
COL5A3-201ENST00000264828 PKP3Q9Y446 797 aa18.83■□□□□ 0.6
COL5A3-201ENST00000264828 NEXMIFQ5QGS0 1516 aa18.83■□□□□ 0.6
COL5A3-201ENST00000264828 POLR1AO95602 1720 aaPredicted RBP18.82■□□□□ 0.6
COL5A3-201ENST00000264828 ZBTB39O15060 712 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 COMTP21964 271 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 TARSP26639 723 aaKnown RBP18.82■□□□□ 0.6
COL5A3-201ENST00000264828 CCDC81Q6ZN84 652 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 SMIM5Q71RC9 77 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 LDHDQ86WU2 507 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 OTUD5Q96G74 571 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 TNIP3Q96KP6 325 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 CXorf56Q9H5V9 222 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 SP8Q8IXZ3 490 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 SH3TC2Q8TF17 1288 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 PABPC5Q96DU9 382 aaKnown RBP18.82■□□□□ 0.6
COL5A3-201ENST00000264828 SHCBP1LQ9BZQ2 653 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 MANSC1Q9H8J5 431 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 AKT1P31749 480 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 ALX1Q15699 326 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 ACSF2Q96CM8 615 aaPredicted RBP18.82■□□□□ 0.6
COL5A3-201ENST00000264828 CD248Q9HCU0 757 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 UVRAGQ9P2Y5 699 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 MTO1Q9Y2Z2 717 aaKnown RBP18.82■□□□□ 0.6
COL5A3-201ENST00000264828 CAB39Q9Y376 341 aaPredicted RBP18.82■□□□□ 0.6
COL5A3-201ENST00000264828 NDUFS3O75489 264 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 HIST1H2AGP0C0S8 130 aaPredicted RBP18.82■□□□□ 0.6
COL5A3-201ENST00000264828 IRF1P10914 325 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 ATP6V1B1P15313 513 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 HIST1H2ADP20671 130 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 KCNJ1P48048 391 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 TMED8Q6PL24 325 aaPredicted RBP18.82■□□□□ 0.6
COL5A3-201ENST00000264828 APPL2Q8NEU8 664 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 GFM2Q969S9 779 aaKnown RBP18.82■□□□□ 0.6
COL5A3-201ENST00000264828 HIST1H2AHQ96KK5 128 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 HIST1H2AJQ99878 128 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 H2AFJQ9BTM1 129 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 DLGAP2Q9P1A6 1054 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 ITIH6Q6UXX5 1313 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 USP31Q70CQ4 1352 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 CDH2P19022 906 aaPredicted RBP18.82■□□□□ 0.6
COL5A3-201ENST00000264828 ZC2HC1CQ53FD0 456 aaPredicted RBP18.82■□□□□ 0.6
COL5A3-201ENST00000264828 SNRNP27Q8WVK2 155 aaKnown RBP18.82■□□□□ 0.6
COL5A3-201ENST00000264828 TSC22D4Q9Y3Q8 395 aa18.82■□□□□ 0.6
COL5A3-201ENST00000264828 GYS1P13807 737 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 RAD51Q06609 339 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 EFHBQ8N7U6 833 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 TSPAN17Q96FV3 270 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 PHF20Q9BVI0 1012 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 SELENONQ9NZV5 590 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 KLHL2O95198 593 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 SLC9A1P19634 815 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 SERPINB9P50453 376 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 NCOA4Q13772 614 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 MLH1P40692 756 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 SGMS1Q86VZ5 419 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 WNK4Q96J92 1243 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 ALDH8A1Q9H2A2 487 aaPredicted RBP18.81■□□□□ 0.6
COL5A3-201ENST00000264828 C1orf167Q5SNV9 1468 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 NAB2Q15742 525 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 SNRNP35Q16560 246 aaKnown RBP18.81■□□□□ 0.6
COL5A3-201ENST00000264828 POTEAQ6S8J7 498 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 WDR48Q8TAF3 677 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 SGSM3Q96HU1 749 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 CCT8L1PA6NM43 557 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 NFIXQ14938 502 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 GJB7Q6PEY0 223 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 BARGINQ6ZT62 677 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 TC2NQ8N9U0 490 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 SHCBP1Q8NEM2 672 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 CMTM5Q96DZ9 223 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 GIMAP4Q9NUV9 329 aa18.81■□□□□ 0.6
COL5A3-201ENST00000264828 MYMKA6NI61 221 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 DTNBP1Q96EV8 351 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 USE1Q9NZ43 259 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 ZC3H13Q5T200 1668 aaKnown RBP18.8■□□□□ 0.6
COL5A3-201ENST00000264828 SOAT1P35610 550 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 GRIN1Q05586 938 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 MROH9Q5TGP6 573 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 LATS2Q9NRM7 1088 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 ZNF263O14978 683 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 EPC2Q52LR7 807 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 CEP78Q5JTW2 689 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 ZNF513Q8N8E2 541 aaPredicted RBP18.8■□□□□ 0.6
COL5A3-201ENST00000264828 C7orf25Q9BPX7 421 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 APOL5Q9BWW9 433 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 DIP2AQ14689 1571 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 OVGP1Q12889 678 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 IL31Q6EBC2 164 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 IYDQ6PHW0 289 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 TRAF7Q6Q0C0 670 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 RAB42Q8N4Z0 105 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 PCYOX1LQ8NBM8 494 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 NOA1Q8NC60 698 aaKnown RBP18.8■□□□□ 0.6
COL5A3-201ENST00000264828 UBA3Q8TBC4 463 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 M0R3G1 203 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 PIGHQ14442 188 aaPredicted RBP18.8■□□□□ 0.6
COL5A3-201ENST00000264828 CYP4A22Q5TCH4 519 aa18.8■□□□□ 0.6
COL5A3-201ENST00000264828 IPMKQ8NFU5 416 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms