RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 TCEA2Q15560 299 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 TMEM169Q96HH4 297 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 TUBE1Q9UJT0 475 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 DBR1Q9UK59 544 aaKnown RBP12.76□□□□□ -0.37
SPG11-201ENST00000261866 CNTNAP4Q9C0A0 1308 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 HMOX2P30519 316 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 RFC5P40937 340 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 TRIM28Q13263 835 aaKnown RBP12.76□□□□□ -0.37
SPG11-201ENST00000261866 PKN3Q6P5Z2 889 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 OSMRQ99650 979 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 TRIM15Q9C019 465 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.76□□□□□ -0.37
SPG11-201ENST00000261866 SLC38A7Q9NVC3 462 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 ARHGEF38Q9NXL2 777 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 CHMP2BQ9UQN3 213 aa12.76□□□□□ -0.37
SPG11-201ENST00000261866 RRP15Q9Y3B9 282 aaKnown RBP12.76□□□□□ -0.37
SPG11-201ENST00000261866 EIF3BP55884 814 aaKnown RBP12.75□□□□□ -0.37
SPG11-201ENST00000261866 BTKQ06187 659 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 CXCL9Q07325 125 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 ENOSF1Q7L5Y1 443 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 EXTL3O43909 919 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 ACO1P21399 889 aaKnown RBP12.75□□□□□ -0.37
SPG11-201ENST00000261866 TRIM72Q6ZMU5 477 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 PCMTD2Q9NV79 361 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 ZDHHC9Q9Y397 364 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 NCF1BA6NI72 391 aaPredicted RBP12.75□□□□□ -0.37
SPG11-201ENST00000261866 NCF1CA8MVU1 366 aaPredicted RBP12.75□□□□□ -0.37
SPG11-201ENST00000261866 ICAM1P05362 532 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 NCF1P14598 390 aaPredicted RBP12.75□□□□□ -0.37
SPG11-201ENST00000261866 UCHL3P15374 230 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 ARHGAP15Q53QZ3 475 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 SEC24DO94855 1032 aaPredicted RBP12.75□□□□□ -0.37
SPG11-201ENST00000261866 MYL4P12829 197 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 AKAP5P24588 427 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 RAB42Q8N4Z0 105 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 GPATCH2LQ9NWQ4 482 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 ZFXP17010 805 aaPredicted RBP12.75□□□□□ -0.37
SPG11-201ENST00000261866 MZF1P28698 734 aaPredicted RBP12.75□□□□□ -0.37
SPG11-201ENST00000261866 BACE1P56817 501 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 MDM2Q00987 491 aaPredicted RBP12.75□□□□□ -0.37
SPG11-201ENST00000261866 CUL3Q13618 768 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 USP10Q14694 798 aaKnown RBP12.75□□□□□ -0.37
SPG11-201ENST00000261866 CCDC124Q96CT7 223 aaKnown RBP12.75□□□□□ -0.37
SPG11-201ENST00000261866 SLC25A13Q9UJS0 675 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 PNMA8BQ9ULN7 279 aaPredicted RBP12.75□□□□□ -0.37
SPG11-201ENST00000261866 SLC30A1Q9Y6M5 507 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 CEP70Q8NHQ1 597 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 PGLYRP2Q96PD5 576 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 PRMT1Q99873 361 aaKnown RBP12.75□□□□□ -0.37
SPG11-201ENST00000261866 MTFR1LQ9H019 292 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 ADGRG1Q9Y653 693 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 NEXMIFQ5QGS0 1516 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 M0QYT0 321 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 HIST1H2AGP0C0S8 130 aaPredicted RBP12.75□□□□□ -0.37
SPG11-201ENST00000261866 HIST1H2ADP20671 130 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 IFNA8P32881 189 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 PLIN5Q00G26 463 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 PTRHD1Q6GMV3 140 aaKnown RBP12.75□□□□□ -0.37
SPG11-201ENST00000261866 DNAAF5Q86Y56 855 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 C4orf33Q8N1A6 199 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 FBXO41Q8TF61 875 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 HIST1H2AHQ96KK5 128 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 HIST1H2AJQ99878 128 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 H2AFJQ9BTM1 129 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 LRRC1Q9BTT6 524 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 AURKCQ9UQB9 309 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 V9GYQ6 96 aa12.75□□□□□ -0.37
SPG11-201ENST00000261866 HMGB1P1B2RPK0 211 aaPredicted RBP12.74□□□□□ -0.37
SPG11-201ENST00000261866 PMPCBO75439 489 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 FAM200BP0CF97 657 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 RCAN1P53805 252 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 FAM71DQ8N9W8 422 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 IL1RL2Q9HB29 575 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 WARS2Q9UGM6 360 aaKnown RBP12.74□□□□□ -0.37
SPG11-201ENST00000261866 TBX20Q9UMR3 447 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 ODC1P11926 461 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 DIP2AQ14689 1571 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 TMEM150BA6NC51 233 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 ASAP2O43150 1006 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 AP1G2O75843 785 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 CHRM3P20309 590 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 TAF6P49848 677 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 KCNT1Q5JUK3 1230 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 TRAPPC12Q8WVT3 735 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 DNAJB3Q8WWF6 145 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 C9orf72Q96LT7 481 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 CDV3Q9UKY7 258 aaKnown RBP12.74□□□□□ -0.37
SPG11-201ENST00000261866 TRIM17Q9Y577 477 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 TBKBP1A7MCY6 615 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 SLC16A3O15427 465 aaKnown RBP12.74□□□□□ -0.37
SPG11-201ENST00000261866 MED24O75448 989 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 HSPA8P11142 646 aaKnown RBP12.74□□□□□ -0.37
SPG11-201ENST00000261866 IGFBP4P22692 258 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 SLC8A1P32418 973 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 TJAP1Q5JTD0 557 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 OR2W6PQ8NHA6 318 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 CINPQ9BW66 212 aaPredicted RBP12.74□□□□□ -0.37
SPG11-201ENST00000261866 STK33Q9BYT3 514 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 TASP1Q9H6P5 420 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 CYB561D2O14569 222 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms