RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 TRAF7Q6Q0C0 670 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 CPA5Q8WXQ8 436 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 TFAP2BQ92481 460 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 TRAIPQ9BWF2 469 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 PDCL3Q9H2J4 239 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 GOLPH3Q9H4A6 298 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 FAM124BQ9H5Z6 455 aaPredicted RBP16.23■□□□□ 0.19
HDHD3-201ENST00000238379 WBP1LQ9NX94 342 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 PUF60Q9UHX1 559 aaKnown RBP16.23■□□□□ 0.19
HDHD3-201ENST00000238379 GTF3C4Q9UKN8 822 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 SQORQ9Y6N5 450 aa16.23■□□□□ 0.19
HDHD3-201ENST00000238379 MEIS3P2A8K0S8 358 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 PIRO00625 290 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 PTGESO14684 152 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 BUB1BO60566 1050 aaPredicted RBP16.22■□□□□ 0.19
HDHD3-201ENST00000238379 MTA2O94776 668 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 PAEPP09466 180 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 CKBP12277 381 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 ZSCAN20P17040 1043 aaPredicted RBP16.22■□□□□ 0.19
HDHD3-201ENST00000238379 CYP3A5P20815 502 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 BRD2P25440 801 aaKnown RBP16.22■□□□□ 0.19
HDHD3-201ENST00000238379 TNNC1P63316 161 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 SOX4Q06945 474 aaPredicted RBP16.22■□□□□ 0.19
HDHD3-201ENST00000238379 INCA1Q0VD86 236 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 PAK2Q13177 524 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 MRPL10Q7Z7H8 261 aaKnown RBP16.22■□□□□ 0.19
HDHD3-201ENST00000238379 MCOLN2Q8IZK6 566 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 CEP112Q8N8E3 955 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 USP38Q8NB14 1042 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 ZFP42Q96MM3 310 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 OSBPL9Q96SU4 736 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 HYOU1Q9Y4L1 999 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 SCN1AP35498 2009 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 DNM1LO00429 736 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 ZNF185O15231 689 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 TLR3O15455 904 aaKnown RBP16.22■□□□□ 0.19
HDHD3-201ENST00000238379 XPOTO43592 962 aaKnown RBP16.22■□□□□ 0.19
HDHD3-201ENST00000238379 MGEA5O60502 916 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 ITGA4P13612 1032 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 TCP1P17987 556 aaKnown RBP16.22■□□□□ 0.19
HDHD3-201ENST00000238379 SSTR3P32745 418 aaPredicted RBP16.22■□□□□ 0.19
HDHD3-201ENST00000238379 CDK7P50613 346 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 PASD1Q8IV76 773 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 SLC4A11Q8NBS3 891 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 ZNF653Q96CK0 615 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 CALR3Q96L12 384 aaKnown RBP16.22■□□□□ 0.19
HDHD3-201ENST00000238379 PPP1R10Q96QC0 940 aaKnown RBP16.22■□□□□ 0.19
HDHD3-201ENST00000238379 TWNKQ96RR1 684 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 MMS19Q96T76 1030 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 ELOVL4Q9GZR5 314 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 ABCB6Q9NP58 842 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 CTTNBP2NLQ9P2B4 639 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 HMGXB4Q9UGU5 601 aa16.22■□□□□ 0.19
HDHD3-201ENST00000238379 EFCAB8A8MWE9 144 aa16.21■□□□□ 0.19
HDHD3-201ENST00000238379 ATMINO43313 823 aaPredicted RBP16.21■□□□□ 0.19
HDHD3-201ENST00000238379 ZNF623O75123 536 aa16.21■□□□□ 0.19
HDHD3-201ENST00000238379 NSFP46459 744 aaKnown RBP16.21■□□□□ 0.19
HDHD3-201ENST00000238379 MTFR1Q15390 333 aa16.21■□□□□ 0.19
HDHD3-201ENST00000238379 MON1BQ7L1V2 547 aa16.21■□□□□ 0.19
HDHD3-201ENST00000238379 DAAM2Q86T65 1068 aa16.21■□□□□ 0.19
HDHD3-201ENST00000238379 CREG2Q8IUH2 290 aa16.21■□□□□ 0.19
HDHD3-201ENST00000238379 HACE1Q8IYU2 909 aa16.21■□□□□ 0.19
HDHD3-201ENST00000238379 SYCE1Q8N0S2 351 aa16.21■□□□□ 0.19
HDHD3-201ENST00000238379 GSTCDQ8NEC7 633 aa16.21■□□□□ 0.19
HDHD3-201ENST00000238379 COG1Q8WTW3 980 aa16.21■□□□□ 0.19
HDHD3-201ENST00000238379 DEFB118Q96PH6 123 aa16.21■□□□□ 0.19
HDHD3-201ENST00000238379 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.21■□□□□ 0.19
HDHD3-201ENST00000238379 CHORDC1Q9UHD1 332 aaPredicted RBP16.21■□□□□ 0.19
HDHD3-201ENST00000238379 BARX2Q9UMQ3 279 aaPredicted RBP16.21■□□□□ 0.19
HDHD3-201ENST00000238379 PCDHGC3Q9UN70 934 aa16.21■□□□□ 0.19
HDHD3-201ENST00000238379 PACSIN2Q9UNF0 486 aaPredicted RBP16.21■□□□□ 0.19
HDHD3-201ENST00000238379 STXBP5LQ9Y2K9 1186 aa16.21■□□□□ 0.19
HDHD3-201ENST00000238379 V9GYY5 206 aaPredicted RBP16.21■□□□□ 0.19
HDHD3-201ENST00000238379 CXCR5P32302 372 aa16.2■□□□□ 0.18
HDHD3-201ENST00000238379 AGMOQ6ZNB7 445 aa16.2■□□□□ 0.18
HDHD3-201ENST00000238379 NT5DC3Q86UY8 548 aa16.2■□□□□ 0.18
HDHD3-201ENST00000238379 PHF13Q86YI8 300 aaPredicted RBP16.2■□□□□ 0.18
HDHD3-201ENST00000238379 TTC39CQ8N584 583 aa16.2■□□□□ 0.18
HDHD3-201ENST00000238379 LPPQ93052 612 aa16.2■□□□□ 0.18
HDHD3-201ENST00000238379 TMEM176AQ96HP8 235 aa16.2■□□□□ 0.18
HDHD3-201ENST00000238379 PSMB7Q99436 277 aa16.2■□□□□ 0.18
HDHD3-201ENST00000238379 GOLGA2P5Q9HBQ8 144 aa16.2■□□□□ 0.18
HDHD3-201ENST00000238379 AVENQ9NQS1 362 aaPredicted RBP16.2■□□□□ 0.18
HDHD3-201ENST00000238379 CNOT8Q9UFF9 292 aaKnown RBP16.2■□□□□ 0.18
HDHD3-201ENST00000238379 SNX9Q9Y5X1 595 aa16.2■□□□□ 0.18
HDHD3-201ENST00000238379 BRCA2P51587 3418 aa16.2■□□□□ 0.18
HDHD3-201ENST00000238379 CEP350Q5VT06 3117 aa16.2■□□□□ 0.18
HDHD3-201ENST00000238379 A0A0U1RQF3 1178 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 LSM8O95777 96 aaKnown RBP16.19■□□□□ 0.18
HDHD3-201ENST00000238379 MYCP01106 439 aaPredicted RBP16.19■□□□□ 0.18
HDHD3-201ENST00000238379 MYBL1P10243 752 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 CDH5P33151 784 aaPredicted RBP16.19■□□□□ 0.18
HDHD3-201ENST00000238379 MLH1P40692 756 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 AFF1P51825 1210 aaKnown RBP16.19■□□□□ 0.18
HDHD3-201ENST00000238379 NDST1P52848 882 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 PTP4A2Q12974 167 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 ORC1Q13415 861 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 MBTPS1Q14703 1052 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 ERCC6LQ2NKX8 1250 aa16.19■□□□□ 0.18
HDHD3-201ENST00000238379 PPP1R2P3Q6NXS1 205 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms