RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 UIMC1Q96RL1 719 aa16.87■□□□□ 0.29
SF3A2-201ENST00000221494 MAP3K20Q9NYL2 800 aaKnown RBP16.87■□□□□ 0.29
SF3A2-201ENST00000221494 LARSQ9P2J5 1176 aaKnown RBP16.87■□□□□ 0.29
SF3A2-201ENST00000221494 KCNH4Q9UQ05 1017 aa16.87■□□□□ 0.29
SF3A2-201ENST00000221494 COQ4Q9Y3A0 265 aa16.87■□□□□ 0.29
SF3A2-201ENST00000221494 RASA4BC9J798 803 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 RASA4O43374 803 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 EDF1O60869 148 aaKnown RBP16.86■□□□□ 0.29
SF3A2-201ENST00000221494 ECM2O94769 699 aaPredicted RBP16.86■□□□□ 0.29
SF3A2-201ENST00000221494 NEFHP12036 1026 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 PPP3CAQ08209 521 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 SLC45A4Q5BKX6 768 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 ZC3H12AQ5D1E8 599 aaKnown RBP16.86■□□□□ 0.29
SF3A2-201ENST00000221494 RINLQ6ZS11 566 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 ENOSF1Q7L5Y1 443 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 ANKS1BQ7Z6G8 1248 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 SRRM1Q8IYB3 904 aaKnown RBP16.86■□□□□ 0.29
SF3A2-201ENST00000221494 SAMD3Q8N6K7 520 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 SYTL5Q8TDW5 730 aaPredicted RBP16.86■□□□□ 0.29
SF3A2-201ENST00000221494 DCLRE1BQ9H816 532 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 RRAGCQ9HB90 399 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 FETUBQ9UGM5 382 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 PHTF1Q9UMS5 762 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 ARHGEF35A5YM69 484 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 PSTPIP1O43586 416 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 ADCY8P40145 1251 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 WDR4P57081 412 aaKnown RBP16.86■□□□□ 0.29
SF3A2-201ENST00000221494 UBXN2AP68543 259 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 SARNPP82979 210 aaKnown RBP16.86■□□□□ 0.29
SF3A2-201ENST00000221494 PPIL2Q13356 520 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 KCTD19Q17RG1 926 aaPredicted RBP16.86■□□□□ 0.29
SF3A2-201ENST00000221494 ZNF365Q70YC5 407 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 C1orf54Q8WWF1 131 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 ERP27Q96DN0 273 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 PHACTR1Q9C0D0 580 aa16.86■□□□□ 0.29
SF3A2-201ENST00000221494 LRRD1A4D1F6 860 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 GAS7O60861 476 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 LINGO3P0C6S8 592 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 CYP11B1P15538 503 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 GTF2H1P32780 548 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 GPC3P51654 580 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 RPS6P62753 249 aaKnown RBP16.85■□□□□ 0.29
SF3A2-201ENST00000221494 SF3A3Q12874 501 aaKnown RBP eCLIP16.85■□□□□ 0.291e-7■■■■■ 51.9
SF3A2-201ENST00000221494 C1orf220Q5T0J3 134 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 SNRNP48Q6IEG0 339 aaKnown RBP16.85■□□□□ 0.29
SF3A2-201ENST00000221494 PPP1R2P3Q6NXS1 205 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 B3GNT9Q6UX72 402 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 ZNF677Q86XU0 584 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 CYP4X1Q8N118 509 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 FAM13CQ8NE31 585 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 BCAS3Q9H6U6 928 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 RNF146Q9NTX7 359 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 TRIM33Q9UPN9 1127 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 CHKBQ9Y259 395 aa16.85■□□□□ 0.29
SF3A2-201ENST00000221494 C2CD2LO14523 706 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 PTPN4P29074 926 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 CNGA1P29973 690 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 MAPK4P31152 587 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 RAD23BP54727 409 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 KLF1Q13351 362 aaPredicted RBP16.84■□□□□ 0.29
SF3A2-201ENST00000221494 RBBP5Q15291 538 aaKnown RBP16.84■□□□□ 0.29
SF3A2-201ENST00000221494 ZRSR2Q15696 482 aaKnown RBP16.84■□□□□ 0.29
SF3A2-201ENST00000221494 CLEC16AQ2KHT3 1053 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 TMEM63BQ5T3F8 832 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 ZNF746Q6NUN9 644 aaPredicted RBP16.84■□□□□ 0.29
SF3A2-201ENST00000221494 ZFAND2BQ8WV99 257 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 DHX38Q92620 1227 aaKnown RBP16.84■□□□□ 0.29
SF3A2-201ENST00000221494 OPTNQ96CV9 577 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 KREMEN1Q96MU8 473 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 TEX13BQ9BXU2 312 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 IKZF4Q9H2S9 585 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 KIF9Q9HAQ2 790 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 CHST7Q9NS84 486 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 STOML1Q9UBI4 398 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 SLC24A2Q9UI40 661 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 ANKRD33BA6NCL7 494 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 K7ENM7 598 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 ZWINTO95229 277 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 ATP4AP20648 1035 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 MAGEA4P43358 317 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 CEP55Q53EZ4 464 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 AP1ARQ63HQ0 302 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 ANO7Q6IWH7 933 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 IRGCQ6NXR0 463 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 DRICH1Q6PGQ1 229 aaPredicted RBP16.84■□□□□ 0.29
SF3A2-201ENST00000221494 GADL1Q6ZQY3 521 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 USP37Q86T82 979 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 MFN1Q8IWA4 741 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 RBBP8NLQ8NC74 664 aaPredicted RBP16.84■□□□□ 0.29
SF3A2-201ENST00000221494 LRRC8CQ8TDW0 803 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 C10orf82Q8WW14 230 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 SLC7A6OSQ96CW6 309 aaPredicted RBP16.84■□□□□ 0.29
SF3A2-201ENST00000221494 NUDCD1Q96RS6 583 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 RIT2Q99578 217 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 TBC1D10AQ9BXI6 508 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 TMEM117Q9H0C3 514 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 VCXQ9H320 206 aa16.84■□□□□ 0.29
SF3A2-201ENST00000221494 NFASCO94856 1347 aa16.83■□□□□ 0.29
SF3A2-201ENST00000221494 RLFQ13129 1914 aa16.83■□□□□ 0.29
SF3A2-201ENST00000221494 CYP26A1O43174 497 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms