RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 C2CD2Q9Y426 696 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 DOCK3Q8IZD9 2030 aa31.57■■■□□ 2.64
PABPN1-201ENST00000216727 ZNF394Q53GI3 561 aa31.57■■■□□ 2.64
PABPN1-201ENST00000216727 ZDHHC14Q8IZN3 488 aa31.57■■■□□ 2.64
PABPN1-201ENST00000216727 POLIQ9UNA4 740 aa31.57■■■□□ 2.64
PABPN1-201ENST00000216727 SBDSQ9Y3A5 250 aaKnown RBP eCLIP31.57■■■□□ 2.64
PABPN1-201ENST00000216727 ITGB3P05106 788 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 GUCY2FP51841 1108 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 WDR72Q3MJ13 1102 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 ILDR2Q71H61 639 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 GADD45GIP1Q8TAE8 222 aaPredicted RBP31.56■■■□□ 2.64
PABPN1-201ENST00000216727 KAT2BQ92831 832 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 ACAP3Q96P50 834 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 ADAM21Q9UKJ8 722 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 MBLAC1A4D2B0 266 aaPredicted RBP31.56■■■□□ 2.64
PABPN1-201ENST00000216727 HSF2BPO75031 334 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 SMIM10L2AP0DMW4 78 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 SMIM10L2BP0DMW5 78 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 MAN1A1P33908 653 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 HSPA9P38646 679 aaKnown RBP31.56■■■□□ 2.64
PABPN1-201ENST00000216727 DMTNQ08495 405 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 TMEM132DQ14C87 1099 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 C17orf99Q6UX52 265 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 CD302Q8IX05 232 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 TFAP2BQ92481 460 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 SH3GL2Q99962 352 aa31.56■■■□□ 2.64
PABPN1-201ENST00000216727 DAPK3O43293 454 aa31.55■■■□□ 2.64
PABPN1-201ENST00000216727 RNF40O75150 1001 aa31.55■■■□□ 2.64
PABPN1-201ENST00000216727 PAEPP09466 180 aa31.55■■■□□ 2.64
PABPN1-201ENST00000216727 GRM5P41594 1212 aa31.55■■■□□ 2.64
PABPN1-201ENST00000216727 PCBP1Q15365 356 aaKnown RBP eCLIP31.55■■■□□ 2.645e-7■■□□□ 11.4
PABPN1-201ENST00000216727 DCAF4L1Q3SXM0 396 aa31.55■■■□□ 2.64
PABPN1-201ENST00000216727 TLK2Q86UE8 772 aa31.55■■■□□ 2.64
PABPN1-201ENST00000216727 DDX42Q86XP3 938 aaKnown RBP eCLIP31.55■■■□□ 2.645e-9■■■■□ 23
PABPN1-201ENST00000216727 FEZF2Q8TBJ5 459 aa31.55■■■□□ 2.64
PABPN1-201ENST00000216727 ZBTB9Q96C00 473 aa31.55■■■□□ 2.64
PABPN1-201ENST00000216727 RUNDC3BQ96NL0 473 aa31.55■■■□□ 2.64
PABPN1-201ENST00000216727 NMRK2Q9NPI5 230 aa31.55■■■□□ 2.64
PABPN1-201ENST00000216727 LCMT1Q9UIC8 334 aa31.55■■■□□ 2.64
PABPN1-201ENST00000216727 SMIM35A0A1B0GVV1 85 aa31.54■■■□□ 2.64
PABPN1-201ENST00000216727 FSCN2O14926 492 aa31.54■■■□□ 2.64
PABPN1-201ENST00000216727 LACTBP83111 547 aaPredicted RBP31.54■■■□□ 2.64
PABPN1-201ENST00000216727 KIZQ2M2Z5 673 aa31.54■■■□□ 2.64
PABPN1-201ENST00000216727 OLFML2BQ68BL8 750 aa31.54■■■□□ 2.64
PABPN1-201ENST00000216727 IQCKQ8N0W5 287 aa31.54■■■□□ 2.64
PABPN1-201ENST00000216727 C1orf131Q8NDD1 294 aaKnown RBP31.54■■■□□ 2.64
PABPN1-201ENST00000216727 ERP44Q9BS26 406 aa31.54■■■□□ 2.64
PABPN1-201ENST00000216727 GCOM2Q9BZD3 368 aaPredicted RBP31.54■■■□□ 2.64
PABPN1-201ENST00000216727 CYP3A43Q9HB55 503 aa31.54■■■□□ 2.64
PABPN1-201ENST00000216727 ITGA11Q9UKX5 1188 aa31.54■■■□□ 2.64
PABPN1-201ENST00000216727 CEP83Q9Y592 693 aa31.54■■■□□ 2.64
PABPN1-201ENST00000216727 TLR3O15455 904 aaKnown RBP31.54■■■□□ 2.64
PABPN1-201ENST00000216727 PSTPIP1O43586 416 aa31.54■■■□□ 2.64
PABPN1-201ENST00000216727 SIX1Q15475 284 aaPredicted RBP31.54■■■□□ 2.64
PABPN1-201ENST00000216727 DUPD1Q68J44 220 aa31.54■■■□□ 2.64
PABPN1-201ENST00000216727 APBB1IPQ7Z5R6 666 aaPredicted RBP31.54■■■□□ 2.64
PABPN1-201ENST00000216727 C12orf50Q8NA57 414 aaPredicted RBP31.54■■■□□ 2.64
PABPN1-201ENST00000216727 EXOC4Q96A65 974 aa31.54■■■□□ 2.64
PABPN1-201ENST00000216727 MAGOHBQ96A72 148 aaKnown RBP31.54■■■□□ 2.64
PABPN1-201ENST00000216727 DDX27Q96GQ7 796 aaKnown RBP31.54■■■□□ 2.64
PABPN1-201ENST00000216727 GPR32O75388 356 aa31.53■■■□□ 2.64
PABPN1-201ENST00000216727 STAU1O95793 577 aaKnown RBP31.53■■■□□ 2.64
PABPN1-201ENST00000216727 DRG2P55039 364 aaKnown RBP31.53■■■□□ 2.64
PABPN1-201ENST00000216727 CHADLQ6NUI6 762 aa31.53■■■□□ 2.64
PABPN1-201ENST00000216727 WDTC1Q8N5D0 677 aa31.53■■■□□ 2.64
PABPN1-201ENST00000216727 RIN2Q8WYP3 895 aaPredicted RBP31.53■■■□□ 2.64
PABPN1-201ENST00000216727 LHX5Q9H2C1 402 aa31.53■■■□□ 2.64
PABPN1-201ENST00000216727 FAM124BQ9H5Z6 455 aaPredicted RBP31.53■■■□□ 2.64
PABPN1-201ENST00000216727 RASAL2Q9UJF2 1139 aa31.53■■■□□ 2.64
PABPN1-201ENST00000216727 TCRBV5S1A1TA0A578 114 aa31.53■■■□□ 2.64
PABPN1-201ENST00000216727 MED7O43513 233 aa31.53■■■□□ 2.64
PABPN1-201ENST00000216727 P4HA1P13674 534 aa31.53■■■□□ 2.64
PABPN1-201ENST00000216727 PTGIRP43119 386 aa31.53■■■□□ 2.64
PABPN1-201ENST00000216727 JAMLQ86YT9 394 aa31.53■■■□□ 2.64
PABPN1-201ENST00000216727 C18orf8Q96DM3 657 aa31.53■■■□□ 2.64
PABPN1-201ENST00000216727 TRIM51Q9BSJ1 452 aa31.53■■■□□ 2.64
PABPN1-201ENST00000216727 IP6K2Q9UHH9 426 aa31.53■■■□□ 2.64
PABPN1-201ENST00000216727 OPA1O60313 960 aa31.52■■■□□ 2.64
PABPN1-201ENST00000216727 GYS2P54840 703 aa31.52■■■□□ 2.64
PABPN1-201ENST00000216727 RHOT1Q8IXI2 618 aa31.52■■■□□ 2.64
PABPN1-201ENST00000216727 LRRC45Q96CN5 670 aa31.52■■■□□ 2.64
PABPN1-201ENST00000216727 NEUROG2Q9H2A3 272 aa31.52■■■□□ 2.64
PABPN1-201ENST00000216727 Q9Y3F1 56 aa31.52■■■□□ 2.64
PABPN1-201ENST00000216727 TCRBV7S2A1N4TA0A589 114 aa31.51■■■□□ 2.64
PABPN1-201ENST00000216727 TMEM191CA6NGB0 347 aa31.51■■■□□ 2.64
PABPN1-201ENST00000216727 RARAP10276 462 aa31.51■■■□□ 2.64
PABPN1-201ENST00000216727 HOXA11P31270 313 aaPredicted RBP31.51■■■□□ 2.64
PABPN1-201ENST00000216727 RAP1GAPP47736 663 aa31.51■■■□□ 2.64
PABPN1-201ENST00000216727 FNTAP49354 379 aa31.51■■■□□ 2.64
PABPN1-201ENST00000216727 RAD23BP54727 409 aa31.51■■■□□ 2.64
PABPN1-201ENST00000216727 MFSD10Q14728 455 aa31.51■■■□□ 2.64
PABPN1-201ENST00000216727 CFAP58Q5T655 872 aa31.51■■■□□ 2.64
PABPN1-201ENST00000216727 MAIP1Q8WWC4 291 aa31.51■■■□□ 2.64
PABPN1-201ENST00000216727 FAM49AQ9H0Q0 323 aaPredicted RBP31.51■■■□□ 2.64
PABPN1-201ENST00000216727 SDCBP2Q9H190 292 aa31.51■■■□□ 2.64
PABPN1-201ENST00000216727 PLEKHA5Q9HAU0 1116 aa31.51■■■□□ 2.64
PABPN1-201ENST00000216727 PSD3Q9NYI0 1048 aa31.51■■■□□ 2.64
PABPN1-201ENST00000216727 HAS3O00219 553 aa31.51■■■□□ 2.63
PABPN1-201ENST00000216727 PODXLO00592 558 aa31.51■■■□□ 2.63
PABPN1-201ENST00000216727 CYP2C19P33261 490 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms