RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 ECI2O75521 394 aa23.97■■□□□ 1.43
VTI1B-201ENST00000216456 GCNT3O95395 438 aa23.97■■□□□ 1.43
VTI1B-201ENST00000216456 SCN1AP35498 2009 aa23.97■■□□□ 1.43
VTI1B-201ENST00000216456 STAT6P42226 847 aa23.97■■□□□ 1.43
VTI1B-201ENST00000216456 UBXN2BQ14CS0 331 aa23.97■■□□□ 1.43
VTI1B-201ENST00000216456 STXBP5Q5T5C0 1151 aa23.97■■□□□ 1.43
VTI1B-201ENST00000216456 SHKBP1Q8TBC3 707 aa23.97■■□□□ 1.43
VTI1B-201ENST00000216456 DDX23Q9BUQ8 820 aaKnown RBP23.97■■□□□ 1.43
VTI1B-201ENST00000216456 LRRC3Q9BY71 257 aa23.97■■□□□ 1.43
VTI1B-201ENST00000216456 HEBP1Q9NRV9 189 aa23.97■■□□□ 1.43
VTI1B-201ENST00000216456 TSC2P49815 1807 aa23.96■■□□□ 1.43
VTI1B-201ENST00000216456 GOLGA8IPA6NC78 632 aa23.96■■□□□ 1.43
VTI1B-201ENST00000216456 GOLGA8JA6NMD2 632 aa23.96■■□□□ 1.43
VTI1B-201ENST00000216456 TYMPP19971 482 aa23.96■■□□□ 1.43
VTI1B-201ENST00000216456 SCP2P22307 547 aa23.96■■□□□ 1.43
VTI1B-201ENST00000216456 GPR17Q13304 367 aa23.96■■□□□ 1.43
VTI1B-201ENST00000216456 FOXD4L6Q3SYB3 417 aaPredicted RBP23.96■■□□□ 1.43
VTI1B-201ENST00000216456 CYP4A22Q5TCH4 519 aa23.96■■□□□ 1.43
VTI1B-201ENST00000216456 IQCEQ6IPM2 695 aa23.96■■□□□ 1.43
VTI1B-201ENST00000216456 CENPPQ6IPU0 288 aa23.96■■□□□ 1.43
VTI1B-201ENST00000216456 FOXD4L3Q6VB84 417 aaPredicted RBP23.96■■□□□ 1.43
VTI1B-201ENST00000216456 TMC8Q8IU68 726 aa23.96■■□□□ 1.43
VTI1B-201ENST00000216456 CD302Q8IX05 232 aa23.96■■□□□ 1.43
VTI1B-201ENST00000216456 RSPRY1Q96DX4 576 aa23.96■■□□□ 1.43
VTI1B-201ENST00000216456 ASB16Q96NS5 453 aa23.96■■□□□ 1.43
VTI1B-201ENST00000216456 FAM213AQ9BRX8 229 aa23.96■■□□□ 1.43
VTI1B-201ENST00000216456 ZNF334Q9HCZ1 680 aaPredicted RBP23.96■■□□□ 1.43
VTI1B-201ENST00000216456 DPP3Q9NY33 737 aa23.96■■□□□ 1.43
VTI1B-201ENST00000216456 KANSL1LA0AUZ9 987 aa23.95■■□□□ 1.42
VTI1B-201ENST00000216456 OR6C75A6NL08 312 aa23.95■■□□□ 1.42
VTI1B-201ENST00000216456 ODC1P11926 461 aa23.95■■□□□ 1.42
VTI1B-201ENST00000216456 TXLNAP40222 546 aa23.95■■□□□ 1.42
VTI1B-201ENST00000216456 NASPP49321 788 aaPredicted RBP23.95■■□□□ 1.42
VTI1B-201ENST00000216456 L1TD1Q5T7N2 865 aaKnown RBP23.95■■□□□ 1.42
VTI1B-201ENST00000216456 SLFN12LQ6IEE8 588 aa23.95■■□□□ 1.42
VTI1B-201ENST00000216456 VITQ6UXI7 678 aa23.95■■□□□ 1.42
VTI1B-201ENST00000216456 TPRG1Q6ZUI0 275 aa23.95■■□□□ 1.42
VTI1B-201ENST00000216456 MAML2Q8IZL2 1156 aaPredicted RBP23.95■■□□□ 1.42
VTI1B-201ENST00000216456 ELMOD1Q8N336 334 aa23.95■■□□□ 1.42
VTI1B-201ENST00000216456 ELSPBP1Q96BH3 223 aa23.95■■□□□ 1.42
VTI1B-201ENST00000216456 BORCS6Q96GS4 357 aa23.95■■□□□ 1.42
VTI1B-201ENST00000216456 PYM1Q9BRP8 204 aaKnown RBP23.95■■□□□ 1.42
VTI1B-201ENST00000216456 CBWD1Q9BRT8 395 aa23.95■■□□□ 1.42
VTI1B-201ENST00000216456 ASB7Q9H672 318 aa23.95■■□□□ 1.42
VTI1B-201ENST00000216456 ASAH2Q9NR71 780 aa23.95■■□□□ 1.42
VTI1B-201ENST00000216456 A0A1W2PRU2 124 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 FAM170BA6NMN3 283 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 ZNF197O14709 1029 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 PRPF6O94906 941 aaKnown RBP23.94■■□□□ 1.42
VTI1B-201ENST00000216456 TARSP26639 723 aaKnown RBP23.94■■□□□ 1.42
VTI1B-201ENST00000216456 EPHA5P54756 1037 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 STK38Q15208 465 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 WSCD1Q658N2 575 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 CCDC73Q6ZRK6 1079 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 LRRTM3Q86VH5 581 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 LINC00301Q8NCQ3 95 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 NOC3LQ8WTT2 800 aaKnown RBP23.94■■□□□ 1.42
VTI1B-201ENST00000216456 LPIN3Q9BQK8 851 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 PCIF1Q9H4Z3 704 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 ZFP14Q9HCL3 533 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 LTB4R2Q9NPC1 389 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 PANK4Q9NVE7 773 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 DERAQ9Y315 318 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 C2CD2Q9Y426 696 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 WDR87Q6ZQQ6 2873 aa23.94■■□□□ 1.42
VTI1B-201ENST00000216456 FRMD3A2A2Y4 597 aa23.93■■□□□ 1.42
VTI1B-201ENST00000216456 CYB561D2O14569 222 aa23.93■■□□□ 1.42
VTI1B-201ENST00000216456 GAP43P17677 238 aa23.93■■□□□ 1.42
VTI1B-201ENST00000216456 SLC39A12Q504Y0 691 aa23.93■■□□□ 1.42
VTI1B-201ENST00000216456 C1orf210Q8IVY1 113 aa23.93■■□□□ 1.42
VTI1B-201ENST00000216456 ZSCAN18Q8TBC5 510 aaPredicted RBP23.93■■□□□ 1.42
VTI1B-201ENST00000216456 NKD2Q969F2 451 aaPredicted RBP23.93■■□□□ 1.42
VTI1B-201ENST00000216456 HVCN1Q96D96 273 aa23.93■■□□□ 1.42
VTI1B-201ENST00000216456 SHDQ96IW2 340 aa23.93■■□□□ 1.42
VTI1B-201ENST00000216456 ACCSQ96QU6 501 aa23.93■■□□□ 1.42
VTI1B-201ENST00000216456 TSPAN18Q96SJ8 248 aa23.93■■□□□ 1.42
VTI1B-201ENST00000216456 ZSCAN16Q9H4T2 348 aaPredicted RBP23.93■■□□□ 1.42
VTI1B-201ENST00000216456 SEL1LQ9UBV2 794 aa23.93■■□□□ 1.42
VTI1B-201ENST00000216456 TFAMQ00059 246 aaKnown RBP23.92■■□□□ 1.42
VTI1B-201ENST00000216456 PFKPQ01813 784 aa23.92■■□□□ 1.42
VTI1B-201ENST00000216456 PRKCQQ04759 706 aa23.92■■□□□ 1.42
VTI1B-201ENST00000216456 MYBPC2Q14324 1141 aa23.92■■□□□ 1.42
VTI1B-201ENST00000216456 STKLD1Q8NE28 680 aa23.92■■□□□ 1.42
VTI1B-201ENST00000216456 SMARCD2Q92925 531 aa23.92■■□□□ 1.42
VTI1B-201ENST00000216456 SLITRK6Q9H5Y7 841 aa23.92■■□□□ 1.42
VTI1B-201ENST00000216456 MAFFQ9ULX9 164 aa23.92■■□□□ 1.42
VTI1B-201ENST00000216456 PTPRZ1P23471 2315 aaPredicted RBP23.92■■□□□ 1.42
VTI1B-201ENST00000216456 CACNA1IQ9P0X4 2223 aa23.91■■□□□ 1.42
VTI1B-201ENST00000216456 MICAL2O94851 1124 aa23.91■■□□□ 1.42
VTI1B-201ENST00000216456 CYP11A1P05108 521 aa23.91■■□□□ 1.42
VTI1B-201ENST00000216456 SP9P0CG40 484 aa23.91■■□□□ 1.42
VTI1B-201ENST00000216456 GDI1P31150 447 aa23.91■■□□□ 1.42
VTI1B-201ENST00000216456 ABCD1P33897 745 aa23.91■■□□□ 1.42
VTI1B-201ENST00000216456 TAF6P49848 677 aa23.91■■□□□ 1.42
VTI1B-201ENST00000216456 E2F4Q16254 413 aa23.91■■□□□ 1.42
VTI1B-201ENST00000216456 LMBRD2Q68DH5 695 aaPredicted RBP23.91■■□□□ 1.42
VTI1B-201ENST00000216456 ARMCX5Q6P1M9 558 aa23.91■■□□□ 1.42
VTI1B-201ENST00000216456 GAREM2Q75VX8 874 aa23.91■■□□□ 1.42
VTI1B-201ENST00000216456 DNAJB7Q7Z6W7 309 aaPredicted RBP23.91■■□□□ 1.42
VTI1B-201ENST00000216456 SYCP3Q8IZU3 236 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms