RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 ATG4AQ8WYN0 398 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 ACSF2Q96CM8 615 aaPredicted RBP12.6□□□□□ -0.39
TRO-201ENST00000173898 C17orf75Q9HAS0 396 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 PRMT7Q9NVM4 692 aaPredicted RBP12.6□□□□□ -0.39
TRO-201ENST00000173898 HNRNPCL1O60812 293 aaKnown RBP12.6□□□□□ -0.39
TRO-201ENST00000173898 SGPL1O95470 568 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 SNRPAP09012 282 aaKnown RBP12.6□□□□□ -0.39
TRO-201ENST00000173898 MCF2P10911 925 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 GFAPP14136 432 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 SREBF1P36956 1147 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 SERPINB4P48594 390 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 FNTAP49354 379 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 AARSP49588 968 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRO-201ENST00000173898 PMS1P54277 932 aaKnown RBP12.6□□□□□ -0.39
TRO-201ENST00000173898 CYP4A22Q5TCH4 519 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 ZBED2Q9BTP6 218 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 SLC24A3Q9HC58 644 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 ABCA9Q8IUA7 1624 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 CCT8L1PA6NM43 557 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 EZH2Q15910 746 aaKnown RBP12.6□□□□□ -0.39
TRO-201ENST00000173898 LVRNQ6Q4G3 990 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 SAMD7Q7Z3H4 446 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 AGGF1Q8N302 714 aaeCLIP12.6□□□□□ -0.39
TRO-201ENST00000173898 FAM71DQ8N9W8 422 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 TJP2Q9UDY2 1190 aa12.6□□□□□ -0.39
TRO-201ENST00000173898 NRXN1Q9ULB1 1477 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 CTSHP09668 335 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 SERPINB9P50453 376 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 CASP7P55210 303 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 DNAJC3Q13217 504 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 USP10Q14694 798 aaKnown RBP12.59□□□□□ -0.39
TRO-201ENST00000173898 GANCQ8TET4 914 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 SCFD2Q8WU76 684 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 ZC3H15Q8WU90 426 aaKnown RBP12.59□□□□□ -0.39
TRO-201ENST00000173898 RTFDC1Q9BY42 306 aaPredicted RBP12.59□□□□□ -0.39
TRO-201ENST00000173898 NDFIP2Q9NV92 336 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 BAZ2BQ9UIF8 2168 aaKnown RBP12.59□□□□□ -0.39
TRO-201ENST00000173898 CAMSAP1Q5T5Y3 1602 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 TNPO2O14787 897 aaKnown RBP12.59□□□□□ -0.39
TRO-201ENST00000173898 IL18RAPO95256 599 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 GH1P01241 217 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 ICAM1P05362 532 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 KCNA2P16389 499 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 CDC42EP1Q00587 391 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 KCNA1Q09470 495 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 LRRC23Q53EV4 343 aaPredicted RBP12.59□□□□□ -0.39
TRO-201ENST00000173898 CAPRIN2Q6IMN6 1127 aaKnown RBP12.59□□□□□ -0.39
TRO-201ENST00000173898 LRRC8EQ6NSJ5 796 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 MYOZ2Q9NPC6 264 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 SPAG6O75602 509 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 GRIK1P39086 918 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 CUL2Q13617 745 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 KRT33BQ14525 404 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 LBRQ14739 615 aaKnown RBP12.59□□□□□ -0.39
TRO-201ENST00000173898 UGP2Q16851 508 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 LRRC36Q1X8D7 754 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 DCAF6Q58WW2 860 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 RARS2Q5T160 578 aaKnown RBP12.59□□□□□ -0.39
TRO-201ENST00000173898 SZRD1Q7Z422 152 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 LONP2Q86WA8 852 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 FBXL16Q8N461 479 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 RDM1Q8NG50 284 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 FBXO25Q8TCJ0 367 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 ASAP3Q8TDY4 903 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 HPDLQ96IR7 371 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 OSGEPQ9NPF4 335 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 SPATA31A5Q5VU36 1347 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 SPATA31A7Q8IWB4 1347 aa12.59□□□□□ -0.39
TRO-201ENST00000173898 TCRBV5S4A2TA0A5A2 114 aa12.58□□□□□ -0.39
TRO-201ENST00000173898 HBP1O60381 514 aa12.58□□□□□ -0.39
TRO-201ENST00000173898 GPD1P21695 349 aa12.58□□□□□ -0.39
TRO-201ENST00000173898 MAPRE2Q15555 327 aa12.58□□□□□ -0.39
TRO-201ENST00000173898 GPRASP2Q96D09 838 aa12.58□□□□□ -0.39
TRO-201ENST00000173898 PABPC5Q96DU9 382 aaKnown RBP12.58□□□□□ -0.39
TRO-201ENST00000173898 CCDC90BQ9GZT6 254 aa12.58□□□□□ -0.39
TRO-201ENST00000173898 RIOX1Q9H6W3 641 aa12.58□□□□□ -0.39
TRO-201ENST00000173898 YY1AP1Q9H869 796 aa12.58□□□□□ -0.39
TRO-201ENST00000173898 ERAP1Q9NZ08 941 aa12.58□□□□□ -0.39
TRO-201ENST00000173898 SYCE1LA8MT33 242 aa12.58□□□□□ -0.4
TRO-201ENST00000173898 ZBTB22O15209 634 aa12.58□□□□□ -0.4
TRO-201ENST00000173898 C6orf222P0C671 652 aaPredicted RBP12.58□□□□□ -0.4
TRO-201ENST00000173898 GMPSP49915 693 aaPredicted RBP12.58□□□□□ -0.4
TRO-201ENST00000173898 ACCSLQ4AC99 568 aa12.58□□□□□ -0.4
TRO-201ENST00000173898 ZNF571Q7Z3V5 609 aaPredicted RBP12.58□□□□□ -0.4
TRO-201ENST00000173898 SPATA2LQ8IUW3 424 aaPredicted RBP12.58□□□□□ -0.4
TRO-201ENST00000173898 METTL5Q9NRN9 209 aaKnown RBP12.58□□□□□ -0.4
TRO-201ENST00000173898 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRO-201ENST00000173898 SMAPO00193 183 aa12.58□□□□□ -0.4
TRO-201ENST00000173898 MFSD14CQ5VZR4 134 aa12.58□□□□□ -0.4
TRO-201ENST00000173898 PTPRN2Q92932 1015 aa12.58□□□□□ -0.4
TRO-201ENST00000173898 THTPAQ9BU02 230 aa12.58□□□□□ -0.4
TRO-201ENST00000173898 AFF4Q9UHB7 1163 aaKnown RBP12.58□□□□□ -0.4
TRO-201ENST00000173898 TMEM247A6NEH6 219 aa12.58□□□□□ -0.4
TRO-201ENST00000173898 EEF2KO00418 725 aaKnown RBP12.58□□□□□ -0.4
TRO-201ENST00000173898 ENO3P13929 434 aaPredicted RBP12.58□□□□□ -0.4
TRO-201ENST00000173898 CYP11B1P15538 503 aa12.58□□□□□ -0.4
TRO-201ENST00000173898 CAP2P40123 477 aa12.58□□□□□ -0.4
TRO-201ENST00000173898 ZNF720Q7Z2F6 126 aa12.58□□□□□ -0.4
TRO-201ENST00000173898 PPIL6Q8IXY8 311 aa12.58□□□□□ -0.4
TRO-201ENST00000173898 RIBC1Q8N443 379 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms