RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 GRM5P41594 1212 aa20.58■□□□□ 0.89
TRAPPC6A-201ENST00000006275 CCR3P51677 355 aa20.58■□□□□ 0.89
TRAPPC6A-201ENST00000006275 YARSP54577 528 aaKnown RBP20.58■□□□□ 0.89
TRAPPC6A-201ENST00000006275 OSTNP61366 133 aa20.58■□□□□ 0.89
TRAPPC6A-201ENST00000006275 GTF2BQ00403 316 aa20.58■□□□□ 0.89
TRAPPC6A-201ENST00000006275 AMPD3Q01432 767 aa20.58■□□□□ 0.89
TRAPPC6A-201ENST00000006275 NAB2Q15742 525 aa20.58■□□□□ 0.89
TRAPPC6A-201ENST00000006275 ZNF687Q8N1G0 1237 aa20.58■□□□□ 0.89
TRAPPC6A-201ENST00000006275 CEP120Q8N960 986 aa20.58■□□□□ 0.89
TRAPPC6A-201ENST00000006275 CXCL16Q9H2A7 254 aa20.58■□□□□ 0.89
TRAPPC6A-201ENST00000006275 ZFP14Q9HCL3 533 aa20.58■□□□□ 0.89
TRAPPC6A-201ENST00000006275 AVENQ9NQS1 362 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC6A-201ENST00000006275 KBTBD4Q9NVX7 518 aa20.58■□□□□ 0.89
TRAPPC6A-201ENST00000006275 CLDN3O15551 220 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 PTPN2P17706 415 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 LIG4P49917 911 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 NOLC1Q14978 699 aaKnown RBP eCLIP20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ADALQ6DHV7 355 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 POTEHQ6S545 545 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 MAMSTRQ6ZN01 415 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ANKS3Q6ZW76 656 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ZNF720Q7Z2F6 126 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 FAM3CQ92520 227 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 PYM1Q9BRP8 204 aaKnown RBP20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 TRMT61BQ9BVS5 477 aaKnown RBP20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ST6GALNAC4Q9H4F1 302 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 MRPL44Q9H9J2 332 aaKnown RBP20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 LMAN1LQ9HAT1 526 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 MAGEF1Q9HAY2 307 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 SEMA4GQ9NTN9 838 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 PANK4Q9NVE7 773 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 TBC1D7Q9P0N9 293 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 BACE2Q9Y5Z0 518 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 VWA8A3KMH1 1905 aa20.57■□□□□ 0.88
TRAPPC6A-201ENST00000006275 HNRNPDLO14979 420 aaKnown RBP20.56■□□□□ 0.88
TRAPPC6A-201ENST00000006275 FCARP24071 287 aa20.56■□□□□ 0.88
TRAPPC6A-201ENST00000006275 TKTP29401 623 aaKnown RBP20.56■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ELF1P32519 619 aa20.56■□□□□ 0.88
TRAPPC6A-201ENST00000006275 SIM2Q14190 667 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ZC2HC1CQ53FD0 456 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC6A-201ENST00000006275 FAM78AQ5JUQ0 283 aa20.56■□□□□ 0.88
TRAPPC6A-201ENST00000006275 PRR23CQ6ZRP0 262 aa20.56■□□□□ 0.88
TRAPPC6A-201ENST00000006275 MAP4K3Q8IVH8 894 aa20.56■□□□□ 0.88
TRAPPC6A-201ENST00000006275 CCDC65Q8IXS2 484 aa20.56■□□□□ 0.88
TRAPPC6A-201ENST00000006275 IRF7Q92985 503 aa20.56■□□□□ 0.88
TRAPPC6A-201ENST00000006275 DDX27Q96GQ7 796 aaKnown RBP20.56■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ACAP3Q96P50 834 aa20.56■□□□□ 0.88
TRAPPC6A-201ENST00000006275 CORO1BQ9BR76 489 aa20.56■□□□□ 0.88
TRAPPC6A-201ENST00000006275 TOPORSQ9NS56 1045 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC6A-201ENST00000006275 FRMD3A2A2Y4 597 aa20.55■□□□□ 0.88
TRAPPC6A-201ENST00000006275 TMEM189-UBE2V1I3L0A0 370 aa20.55■□□□□ 0.88
TRAPPC6A-201ENST00000006275 PRRG1O14668 218 aa20.55■□□□□ 0.88
TRAPPC6A-201ENST00000006275 PIGRP01833 764 aa20.55■□□□□ 0.88
TRAPPC6A-201ENST00000006275 CMA1P23946 247 aa20.55■□□□□ 0.88
TRAPPC6A-201ENST00000006275 IGFBP6P24592 240 aaPredicted RBP20.55■□□□□ 0.88
TRAPPC6A-201ENST00000006275 MCL1Q07820 350 aa20.55■□□□□ 0.88
TRAPPC6A-201ENST00000006275 GLRA4Q5JXX5 417 aa20.55■□□□□ 0.88
TRAPPC6A-201ENST00000006275 TCEAL4Q96EI5 215 aa20.55■□□□□ 0.88
TRAPPC6A-201ENST00000006275 TRIM9Q9C026 710 aa20.55■□□□□ 0.88
TRAPPC6A-201ENST00000006275 GDPD2Q9HCC8 539 aa20.55■□□□□ 0.88
TRAPPC6A-201ENST00000006275 PIAS3Q9Y6X2 628 aa20.55■□□□□ 0.88
TRAPPC6A-201ENST00000006275 TRIP11Q15643 1979 aa20.55■□□□□ 0.88
TRAPPC6A-201ENST00000006275 A0A1B0GVL5 298 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ARHGEF37A1IGU5 675 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ZNF197O14709 1029 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 TRAPPC3O43617 180 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 GCNT3O95395 438 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 PFKFB1P16118 471 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 GDI1P31150 447 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 CXCL12P48061 93 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ASIC1P78348 528 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 SATB1Q01826 763 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ROR1Q01973 937 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 CSRP2Q16527 193 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 PRSS36Q5K4E3 855 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 CEP57L1Q8IYX8 460 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 HVCN1Q96D96 273 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ZNF334Q9HCZ1 680 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 OLFML3Q9NRN5 406 aa20.54■□□□□ 0.88
TRAPPC6A-201ENST00000006275 CITO14578 2027 aa20.53■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC6A-201ENST00000006275 I3L4J1 428 aa20.53■□□□□ 0.88
TRAPPC6A-201ENST00000006275 PSMC3P17980 439 aa20.53■□□□□ 0.88
TRAPPC6A-201ENST00000006275 CLCNKBP51801 687 aa20.53■□□□□ 0.88
TRAPPC6A-201ENST00000006275 SEZ6Q53EL9 994 aa20.53■□□□□ 0.88
TRAPPC6A-201ENST00000006275 PDZD4Q76G19 769 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ZNF461Q8TAF7 563 aa20.53■□□□□ 0.88
TRAPPC6A-201ENST00000006275 ASB16Q96NS5 453 aa20.53■□□□□ 0.88
TRAPPC6A-201ENST00000006275 C7orf25Q9BPX7 421 aa20.53■□□□□ 0.88
TRAPPC6A-201ENST00000006275 HAPLN2Q9GZV7 340 aa20.53■□□□□ 0.88
TRAPPC6A-201ENST00000006275 SERTAD1Q9UHV2 236 aa20.53■□□□□ 0.88
TRAPPC6A-201ENST00000006275 PCDHB13Q9Y5F0 798 aa20.53■□□□□ 0.88
TRAPPC6A-201ENST00000006275 WDR27A2RRH5 827 aa20.52■□□□□ 0.88
TRAPPC6A-201ENST00000006275 CHURC1-FNTBB4DL54 471 aa20.52■□□□□ 0.88
TRAPPC6A-201ENST00000006275 GDF9O60383 454 aa20.52■□□□□ 0.88
TRAPPC6A-201ENST00000006275 PPP1R37O75864 691 aa20.52■□□□□ 0.88
TRAPPC6A-201ENST00000006275 AFMP43652 599 aa20.52■□□□□ 0.88
TRAPPC6A-201ENST00000006275 BRCC3P46736 316 aa20.52■□□□□ 0.88
TRAPPC6A-201ENST00000006275 FNTBP49356 437 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms