RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Pde10aQ8CA95 790 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Prpf4Q9DAW6 521 aaKnown RBP11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Zfp811A0A0J9YU71 552 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Pcna-ps2A0A140T8V5 261 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 4932429P05RikA2ADI4 785 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Abhd12bG3UZN6 359 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Pdia4P08003 638 aaKnown RBP11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 HmbsP22907 361 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Znrf3Q5SSZ7 913 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Trim38Q5SZ99 471 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Map3k3Q61084 626 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 SucoQ8C341 1250 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Pcdha9Q91Y11 979 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tex19.1Q99MV2 351 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Dmrtc1Q9D9R7 182 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Heg1E9Q7X6 1337 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Apol11bE9PUZ0 337 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Sparcl1P70663 650 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Fgfr4Q03142 799 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Colec11Q3SXB8 272 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ovgp1Q62010 721 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 CbarpQ66L44 698 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Acap2Q6ZQK5 770 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Plppr4Q7TME0 766 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Brat1Q8C3R1 822 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Chordc1Q9D1P4 331 aaKnown RBP11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Zkscan5Q9Z1D8 819 aa11.15□□□□□ -0.62
Limch1-201ENSMUST00000038188 Zscan4-ps3A0A1B0GRH6 506 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Pex10B1AUE5 324 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Lnx1O70263 728 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Cdc6O89033 562 aaKnown RBP11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Dpep1P31428 410 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Akr1b1P45376 316 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Cyfip2Q5SQX6 1253 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Myo1gQ5SUA5 1024 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Colgalt2Q6NVG7 625 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Hdac10Q6P3E7 666 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Olfr26Q7TRB7 308 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Als2cr12Q8BVM7 383 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Cdk17Q8K0D0 523 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Dlk2Q8K1E3 382 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Edem1Q925U4 652 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Lrrc71Q9D3W5 558 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Olfr933Q9EQA0 308 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 PignQ9R1S3 931 aa11.15□□□□□ -0.63
Limch1-201ENSMUST00000038188 Kansl3A2RSY1 903 aaKnown RBP11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Ms4a2P20490 235 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 NxnP97346 435 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 XpaQ64267 272 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Gm7247Q6UY52 187 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Trib2Q8K4K3 343 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Atpaf2Q91YY4 289 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Rnf14Q9JI90 485 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Zfpm1O35615 995 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Scrg1O88745 98 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Mmp3P28862 477 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Mxi1P50540 228 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 4930430A15RikQ05AC5 485 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Fam89aQ14BJ1 175 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Tmem117Q8BH18 514 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Tbc1d13Q8R3D1 400 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Map3k21Q8VDG6 1002 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Cyp2d10P24456 504 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Nipa1Q8BHK1 323 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Snx2Q9CWK8 519 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Fxr2Q9WVR4 673 aaKnown RBP11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Ifnb1P01575 182 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 PfkmP47857 780 aaKnown RBP11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 DmwdQ08274 665 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 SpoplQ2M2N2 392 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Clec16aQ80U30 1036 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 SybuQ8BHS8 665 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Rfc5Q9D0F6 339 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Aldh18a1Q9Z110 795 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Tnip3A0A1D5RMN0 279 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Grik3B1AS29 919 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Ncf2O70145 525 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Lamp2P17047 415 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 PkmP52480 531 aaKnown RBP11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Atp5bP56480 529 aaKnown RBP11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Kcnq1P97414 668 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Sdr16c6Q05A13 316 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Zscan22Q8BGS5 496 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Tbc1d10cQ8C9V1 444 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Wdr24Q8CFJ9 790 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 MlxiplQ99MZ3 864 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Add3Q9QYB5 706 aaKnown RBP11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Ptpn23Q6PB44 1692 aa11.14□□□□□ -0.63
Limch1-201ENSMUST00000038188 Gmeb2P58929 530 aa11.13□□□□□ -0.63
Limch1-201ENSMUST00000038188 Ndst1Q3UHN9 882 aa11.13□□□□□ -0.63
Limch1-201ENSMUST00000038188 Sf1Q64213 653 aaKnown RBP11.13□□□□□ -0.63
Limch1-201ENSMUST00000038188 Bud13Q8R149 637 aa11.13□□□□□ -0.63
Limch1-201ENSMUST00000038188 Tgs1Q923W1 853 aa11.13□□□□□ -0.63
Limch1-201ENSMUST00000038188 Htra3Q9D236 459 aa11.13□□□□□ -0.63
Limch1-201ENSMUST00000038188 Desi2Q9D291 194 aa11.13□□□□□ -0.63
Limch1-201ENSMUST00000038188 Chst7Q9EP78 484 aa11.13□□□□□ -0.63
Limch1-201ENSMUST00000038188 Sgpp1Q9JI99 430 aa11.13□□□□□ -0.63
Limch1-201ENSMUST00000038188 Mon2Q80TL7 1715 aa11.13□□□□□ -0.63
Limch1-201ENSMUST00000038188 PotegA5H0M4 473 aa11.13□□□□□ -0.63
Limch1-201ENSMUST00000038188 Lrriq4A6H6A4 596 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms