RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 TMEM206Q9H813 350 aa27.32■■□□□ 1.96
VEGFA-232ENST00000640653 KBTBD4Q9NVX7 518 aa27.32■■□□□ 1.96
VEGFA-232ENST00000640653 AFF4Q9UHB7 1163 aaKnown RBP27.32■■□□□ 1.96
VEGFA-232ENST00000640653 TIMM13Q9Y5L4 95 aaPredicted RBP27.32■■□□□ 1.96
VEGFA-232ENST00000640653 ZNF318Q5VUA4 2279 aa27.31■■□□□ 1.96
VEGFA-232ENST00000640653 NARSO43776 548 aaKnown RBP27.31■■□□□ 1.96
VEGFA-232ENST00000640653 LDHAP00338 332 aaKnown RBP27.31■■□□□ 1.96
VEGFA-232ENST00000640653 ODC1P11926 461 aa27.31■■□□□ 1.96
VEGFA-232ENST00000640653 TYMPP19971 482 aa27.31■■□□□ 1.96
VEGFA-232ENST00000640653 GARTP22102 1010 aa27.31■■□□□ 1.96
VEGFA-232ENST00000640653 SHC4Q6S5L8 630 aa27.31■■□□□ 1.96
VEGFA-232ENST00000640653 CRELD2Q6UXH1 353 aaPredicted RBP27.31■■□□□ 1.96
VEGFA-232ENST00000640653 STXBP4Q6ZWJ1 553 aa27.31■■□□□ 1.96
VEGFA-232ENST00000640653 NT5DC4Q86YG4 428 aa27.31■■□□□ 1.96
VEGFA-232ENST00000640653 ITFG1Q8TB96 612 aa27.31■■□□□ 1.96
VEGFA-232ENST00000640653 DHX58Q96C10 678 aa27.31■■□□□ 1.96
VEGFA-232ENST00000640653 CFAP45Q9UL16 551 aa27.31■■□□□ 1.96
VEGFA-232ENST00000640653 INSL5Q9Y5Q6 135 aa27.31■■□□□ 1.96
VEGFA-232ENST00000640653 NUMBLQ9Y6R0 609 aa27.31■■□□□ 1.96
VEGFA-232ENST00000640653 ANO9A1A5B4 782 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 OR6C75A6NL08 312 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 PIRO00625 290 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 PPEF2O14830 753 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 SEC24AO95486 1093 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 RHOP08100 348 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 SRFP11831 508 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 PTPN2P17706 415 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 NUBP1P53384 320 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 PTPN5P54829 565 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 ADCY1Q08828 1119 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 OVOS1Q6IE37 1185 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 MTSS1LQ765P7 747 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 ELMOD1Q8N336 334 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 PRSS33Q8NF86 280 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 SENP8Q96LD8 212 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 FAM213AQ9BRX8 229 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 MAGEF1Q9HAY2 307 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 AVENQ9NQS1 362 aaPredicted RBP27.3■■□□□ 1.96
VEGFA-232ENST00000640653 MRPS23Q9Y3D9 190 aaKnown RBP27.3■■□□□ 1.96
VEGFA-232ENST00000640653 KMT2EQ8IZD2 1858 aa27.3■■□□□ 1.96
VEGFA-232ENST00000640653 ME1P48163 572 aa27.29■■□□□ 1.96
VEGFA-232ENST00000640653 NHLH1Q02575 133 aa27.29■■□□□ 1.96
VEGFA-232ENST00000640653 ASTLQ6HA08 431 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-232ENST00000640653 FGFBP2Q9BYJ0 223 aa27.29■■□□□ 1.96
VEGFA-232ENST00000640653 TRIM9Q9C026 710 aa27.29■■□□□ 1.96
VEGFA-232ENST00000640653 DPP3Q9NY33 737 aa27.29■■□□□ 1.96
VEGFA-232ENST00000640653 FAM13BQ9NYF5 915 aa27.29■■□□□ 1.96
VEGFA-232ENST00000640653 WNT16Q9UBV4 365 aa27.29■■□□□ 1.96
VEGFA-232ENST00000640653 DOCK8Q8NF50 2099 aa27.28■■□□□ 1.96
VEGFA-232ENST00000640653 CFHP08603 1231 aa27.28■■□□□ 1.96
VEGFA-232ENST00000640653 ASIC1P78348 528 aa27.28■■□□□ 1.96
VEGFA-232ENST00000640653 PKP1Q13835 747 aa27.28■■□□□ 1.96
VEGFA-232ENST00000640653 RNF19BQ6ZMZ0 732 aa27.28■■□□□ 1.96
VEGFA-232ENST00000640653 SIX5Q8N196 739 aa27.28■■□□□ 1.96
VEGFA-232ENST00000640653 SAAL1Q96ER3 474 aa27.28■■□□□ 1.96
VEGFA-232ENST00000640653 SPTLC1O15269 473 aa27.27■■□□□ 1.96
VEGFA-232ENST00000640653 PRPF6O94906 941 aaKnown RBP27.27■■□□□ 1.96
VEGFA-232ENST00000640653 CLCN5P51795 746 aa27.27■■□□□ 1.96
VEGFA-232ENST00000640653 PARM1Q6UWI2 310 aa27.27■■□□□ 1.96
VEGFA-232ENST00000640653 BRSK2Q8IWQ3 736 aa27.27■■□□□ 1.96
VEGFA-232ENST00000640653 NPAS3Q8IXF0 933 aa27.27■■□□□ 1.96
VEGFA-232ENST00000640653 EFCAB13Q8IY85 973 aa27.27■■□□□ 1.96
VEGFA-232ENST00000640653 FLCNQ8NFG4 579 aa27.27■■□□□ 1.96
VEGFA-232ENST00000640653 CORO1BQ9BR76 489 aa27.27■■□□□ 1.96
VEGFA-232ENST00000640653 DSEQ9UL01 958 aa27.27■■□□□ 1.96
VEGFA-232ENST00000640653 PCDHA7Q9UN72 937 aa27.27■■□□□ 1.96
VEGFA-232ENST00000640653 POLR2DO15514 142 aaKnown RBP27.26■■□□□ 1.95
VEGFA-232ENST00000640653 TAF6P49848 677 aa27.26■■□□□ 1.95
VEGFA-232ENST00000640653 MYBPC2Q14324 1141 aa27.26■■□□□ 1.95
VEGFA-232ENST00000640653 IQCEQ6IPM2 695 aa27.26■■□□□ 1.95
VEGFA-232ENST00000640653 ARMCX5Q6P1M9 558 aa27.26■■□□□ 1.95
VEGFA-232ENST00000640653 CNNM4Q6P4Q7 775 aa27.26■■□□□ 1.95
VEGFA-232ENST00000640653 ING5Q8WYH8 240 aa27.26■■□□□ 1.95
VEGFA-232ENST00000640653 FGF14Q92915 247 aa27.26■■□□□ 1.95
VEGFA-232ENST00000640653 ZNF512Q96ME7 567 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-232ENST00000640653 RBAKQ9NYW8 714 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-232ENST00000640653 GDE1Q9NZC3 331 aa27.26■■□□□ 1.95
VEGFA-232ENST00000640653 TULP1O00294 542 aaPredicted RBP27.25■■□□□ 1.95
VEGFA-232ENST00000640653 ZNF197O14709 1029 aa27.25■■□□□ 1.95
VEGFA-232ENST00000640653 KIAA0391O15091 583 aaKnown RBP27.25■■□□□ 1.95
VEGFA-232ENST00000640653 EXTL3O43909 919 aa27.25■■□□□ 1.95
VEGFA-232ENST00000640653 OR4Q2P0C623 313 aa27.25■■□□□ 1.95
VEGFA-232ENST00000640653 HOXD11P31277 338 aaPredicted RBP27.25■■□□□ 1.95
VEGFA-232ENST00000640653 DNM1Q05193 864 aaKnown RBP27.25■■□□□ 1.95
VEGFA-232ENST00000640653 TWF1Q12792 350 aa27.25■■□□□ 1.95
VEGFA-232ENST00000640653 GPR17Q13304 367 aa27.25■■□□□ 1.95
VEGFA-232ENST00000640653 SLC5A9Q2M3M2 681 aa27.25■■□□□ 1.95
VEGFA-232ENST00000640653 METTL23Q86XA0 190 aa27.25■■□□□ 1.95
VEGFA-232ENST00000640653 TMEM105Q8N8V8 129 aa27.25■■□□□ 1.95
VEGFA-232ENST00000640653 ZNF560Q96MR9 790 aa27.25■■□□□ 1.95
VEGFA-232ENST00000640653 C7orf25Q9BPX7 421 aa27.25■■□□□ 1.95
VEGFA-232ENST00000640653 PYM1Q9BRP8 204 aaKnown RBP27.25■■□□□ 1.95
VEGFA-232ENST00000640653 CBWD1Q9BRT8 395 aa27.25■■□□□ 1.95
VEGFA-232ENST00000640653 IRF2BPLQ9H1B7 796 aa27.25■■□□□ 1.95
VEGFA-232ENST00000640653 SLC2A4RGQ9NR83 387 aa27.25■■□□□ 1.95
VEGFA-232ENST00000640653 ANK1P16157 1881 aa27.25■■□□□ 1.95
VEGFA-232ENST00000640653 CYP11A1P05108 521 aa27.24■■□□□ 1.95
VEGFA-232ENST00000640653 TFAMQ00059 246 aaKnown RBP27.24■■□□□ 1.95
VEGFA-232ENST00000640653 TCF15Q12870 199 aa27.24■■□□□ 1.95
VEGFA-232ENST00000640653 PLD1Q13393 1074 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms