RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 ZNF677Q86XU0 584 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 ZNF564Q8TBZ8 553 aaPredicted RBP23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 WNT8BQ93098 351 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 KIF12Q96FN5 646 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 HES6Q96HZ4 224 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 ZMAT2Q96NC0 199 aaKnown RBP23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 HMGXB4Q9UGU5 601 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 GTF3C4Q9UKN8 822 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 SEPT4O43236 478 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 CEP104O60308 925 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 RARBP10826 455 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 PRKAR2AP13861 404 aaKnown RBP23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 DCAF4L1Q3SXM0 396 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 CFAP221Q4G0U5 840 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 FAM47CQ5HY64 1035 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 NOTUMQ6P988 496 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 MTG1Q9BT17 334 aaPredicted RBP23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 TRIM7Q9C029 511 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 AGAP1Q9UPQ3 857 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 TRPA1O75762 1119 aa23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 RRM1P23921 792 aa23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 AKAP5P24588 427 aa23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 NOMO3P69849 1222 aa23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 ZNF667Q5HYK9 610 aa23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 GDF6Q6KF10 455 aaPredicted RBP23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 MCOLN2Q8IZK6 566 aa23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 ZNF606Q8WXB4 792 aa23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 TFAP2BQ92481 460 aa23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 RPGRIP1Q96KN7 1286 aa23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 C11orf70Q9BRQ4 267 aa23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 CCDC94Q9BW85 323 aaPredicted RBP23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 ALG6Q9Y672 507 aa23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 NSFP46459 744 aaKnown RBP23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 MARCKSL1P49006 195 aa23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 DCAF12L1Q5VU92 463 aa23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 HDAC7Q8WUI4 952 aa23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 XPNPEP3Q9NQH7 507 aa23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 ARGLU1Q9NWB6 273 aaPredicted RBP23.12■■□□□ 1.29
CHRNA7-228ENST00000637519 DDX3YO15523 660 aaKnown RBP23.11■■□□□ 1.29
CHRNA7-228ENST00000637519 ADAMTS4O75173 837 aa23.11■■□□□ 1.29
CHRNA7-228ENST00000637519 HADHBP55084 474 aaKnown RBP23.11■■□□□ 1.29
CHRNA7-228ENST00000637519 CDC42EP1Q00587 391 aa23.11■■□□□ 1.29
CHRNA7-228ENST00000637519 CENPCQ03188 943 aa23.11■■□□□ 1.29
CHRNA7-228ENST00000637519 KCTD19Q17RG1 926 aaPredicted RBP23.11■■□□□ 1.29
CHRNA7-228ENST00000637519 MON1BQ7L1V2 547 aa23.11■■□□□ 1.29
CHRNA7-228ENST00000637519 CD99L2Q8TCZ2 262 aa23.11■■□□□ 1.29
CHRNA7-228ENST00000637519 TRIM6Q9C030 488 aaPredicted RBP23.11■■□□□ 1.29
CHRNA7-228ENST00000637519 UPF3AQ9H1J1 476 aaKnown RBP23.11■■□□□ 1.29
CHRNA7-228ENST00000637519 PLEKHA4Q9H4M7 779 aa23.11■■□□□ 1.29
CHRNA7-228ENST00000637519 DPP3Q9NY33 737 aa23.11■■□□□ 1.29
CHRNA7-228ENST00000637519 TUBGCP4Q9UGJ1 667 aa23.11■■□□□ 1.29
CHRNA7-228ENST00000637519 PPEF2O14830 753 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 RECQL4O94761 1208 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 CTSHP09668 335 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 KRT35Q92764 455 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 SNX27Q96L92 541 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 TWNKQ96RR1 684 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 LRRC1Q9BTT6 524 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 KLK14Q9P0G3 267 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 CITO14578 2027 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 GNAT1P11488 350 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 COMTP21964 271 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 ZNF211Q13398 564 aaPredicted RBP23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 TCEAL1Q15170 157 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 KYAT1Q16773 422 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 C11orf63Q6NUN7 778 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 MMS22LQ6ZRQ5 1243 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 ALG3Q92685 438 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 C18orf25Q96B23 403 aaPredicted RBP23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 HPDLQ96IR7 371 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 BCO2Q9BYV7 579 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 RNF39Q9H2S5 420 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 GTF2IRD1Q9UHL9 959 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 C2CD2Q9Y426 696 aa23.1■■□□□ 1.29
CHRNA7-228ENST00000637519 GJB6O95452 261 aa23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 CRYBB1P53674 252 aaPredicted RBP23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 SLC7A5Q01650 507 aa23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 CC2D1AQ6P1N0 951 aaPredicted RBP23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 C1orf131Q8NDD1 294 aaKnown RBP23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 RAB21Q9UL25 225 aa23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 NOC2LQ9Y3T9 749 aaKnown RBP23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 SCN10AQ9Y5Y9 1956 aa23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 MTA2O94776 668 aa23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 ASGR1P07306 291 aa23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 UBXN11Q5T124 520 aa23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 AADACL2Q6P093 401 aa23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 TMCO3Q6UWJ1 677 aa23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 MTERF4Q7Z6M4 381 aaKnown RBP23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 FAM228AQ86W67 206 aa23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 MMGT1Q8N4V1 131 aa23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 USP38Q8NB14 1042 aa23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 SPC25Q9HBM1 224 aa23.09■■□□□ 1.29
CHRNA7-228ENST00000637519 TRIP11Q15643 1979 aa23.08■■□□□ 1.29
CHRNA7-228ENST00000637519 HTRA3P83110 453 aa23.08■■□□□ 1.29
CHRNA7-228ENST00000637519 GSPT2Q8IYD1 628 aaKnown RBP23.08■■□□□ 1.29
CHRNA7-228ENST00000637519 PBKQ96KB5 322 aa23.08■■□□□ 1.29
CHRNA7-228ENST00000637519 AP1M1Q9BXS5 423 aa23.08■■□□□ 1.29
CHRNA7-228ENST00000637519 ANAPC7Q9UJX3 599 aa23.08■■□□□ 1.29
CHRNA7-228ENST00000637519 CD19P15391 556 aa23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 TUBB4BP68371 445 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms