RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 SLC8B1Q6J4K2 584 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 NT5DC4Q86YG4 428 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 SLC9A9Q8IVB4 645 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 ELOA2Q8IYF1 753 aaPredicted RBP12.03□□□□□ -0.48
DDX41-219ENST00000629036 CMASQ8NFW8 434 aaPredicted RBP12.03□□□□□ -0.48
DDX41-219ENST00000629036 OR5B17Q8NGF7 314 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 ERCC4Q92889 916 aaPredicted RBP12.03□□□□□ -0.48
DDX41-219ENST00000629036 ZNF707Q96C28 371 aaPredicted RBP12.03□□□□□ -0.48
DDX41-219ENST00000629036 EMILIN2Q9BXX0 1053 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 RHOBTB2Q9BYZ6 727 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 MAN1C1Q9NR34 630 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 TSHZ2Q9NRE2 1034 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 DZANK1Q9NVP4 752 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 PCDHB8Q9UN66 801 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 FAM50BQ9Y247 325 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 SSX2IPQ9Y2D8 614 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.03□□□□□ -0.48
DDX41-219ENST00000629036 BACE2Q9Y5Z0 518 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 PTPRZ1P23471 2315 aaPredicted RBP12.03□□□□□ -0.48
DDX41-219ENST00000629036 PATJQ8NI35 1801 aa12.02□□□□□ -0.48
DDX41-219ENST00000629036 KIF26AQ9ULI4 1882 aaPredicted RBP12.02□□□□□ -0.48
DDX41-219ENST00000629036 ANAPC1Q9H1A4 1944 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 LDHAP00338 332 aaKnown RBP12.02□□□□□ -0.49
DDX41-219ENST00000629036 GLUD1P00367 558 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 BMP6P22004 513 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 KLRC2P26717 231 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 MCCD1P59942 119 aaPredicted RBP12.02□□□□□ -0.49
DDX41-219ENST00000629036 FOXK2Q01167 660 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 CYP24A1Q07973 514 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 RAB33AQ14088 237 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 CBX2Q14781 532 aaPredicted RBP12.02□□□□□ -0.49
DDX41-219ENST00000629036 SNRNP35Q16560 246 aaKnown RBP12.02□□□□□ -0.49
DDX41-219ENST00000629036 NFIL3Q16649 462 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 C1orf220Q5T0J3 134 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 KIAA1841Q6NSI8 718 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 PPFIBP1Q86W92 1011 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 CEP57Q86XR8 500 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 ADHFE1Q8IWW8 467 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 SMYD4Q8IYR2 804 aaPredicted RBP12.02□□□□□ -0.49
DDX41-219ENST00000629036 GUF1Q8N442 669 aaKnown RBP12.02□□□□□ -0.49
DDX41-219ENST00000629036 BEST2Q8NFU1 509 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 FAM212AQ96EL1 285 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 RTP3Q9BQQ7 232 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 APOL5Q9BWW9 433 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 MTMR12Q9C0I1 747 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 ADAM7Q9H2U9 754 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 DPP3Q9NY33 737 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 CGNQ9P2M7 1197 aaKnown RBP12.02□□□□□ -0.49
DDX41-219ENST00000629036 TRAF3IP3Q9Y228 551 aa12.02□□□□□ -0.49
DDX41-219ENST00000629036 WDR27A2RRH5 827 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 LOC730098B7Z3J9 87 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 PDXKO00764 312 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 RFPL2O75678 378 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 ABLIM3O94929 683 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 OAZ2O95190 189 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 CYP11A1P05108 521 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 WEE2P0C1S8 567 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 SPATA31D3P0C874 917 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 MCM4P33991 863 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 CA8P35219 290 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 CASP4P49662 377 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 CYP2J2P51589 502 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 CLDN10P78369 228 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 ROR1Q01973 937 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 CREMQ03060 361 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 TCF15Q12870 199 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 BMS1Q14692 1282 aaKnown RBP12.01□□□□□ -0.49
DDX41-219ENST00000629036 PSMD6Q15008 389 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 COBLL1Q53SF7 1204 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 RARS2Q5T160 578 aaKnown RBP12.01□□□□□ -0.49
DDX41-219ENST00000629036 LMBRD2Q68DH5 695 aaPredicted RBP12.01□□□□□ -0.49
DDX41-219ENST00000629036 SPATA31D4Q6ZUB0 917 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 ANKS3Q6ZW76 656 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 LIMS2Q7Z4I7 341 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 GPR149Q86SP6 731 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 PALB2Q86YC2 1186 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 GLYCTKQ8IVS8 523 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 ZC3H3Q8IXZ2 948 aaKnown RBP12.01□□□□□ -0.49
DDX41-219ENST00000629036 XXYLT1Q8NBI6 393 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 HDAC7Q8WUI4 952 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 ZNF516Q92618 1163 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 PBXIP1Q96AQ6 731 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 POMKQ9H5K3 350 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 SFXN1Q9H9B4 322 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 INTS13Q9NVM9 706 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 PRKAG3Q9UGI9 489 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 FBXL5Q9UKA1 691 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 PCDHA5Q9Y5H7 936 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 CDY1Q9Y6F8 540 aa12.01□□□□□ -0.49
DDX41-219ENST00000629036 NUP210Q8TEM1 1887 aaPredicted RBP12.01□□□□□ -0.49
DDX41-219ENST00000629036 COL4A2P08572 1712 aa12□□□□□ -0.49
DDX41-219ENST00000629036 ZNF233A6NK53 670 aa12□□□□□ -0.49
DDX41-219ENST00000629036 XPOTO43592 962 aaKnown RBP12□□□□□ -0.49
DDX41-219ENST00000629036 TRAPPC3O43617 180 aa12□□□□□ -0.49
DDX41-219ENST00000629036 SRGAP2BP0DMP2 458 aa12□□□□□ -0.49
DDX41-219ENST00000629036 TYMPP19971 482 aa12□□□□□ -0.49
DDX41-219ENST00000629036 OR1D2P34982 312 aa12□□□□□ -0.49
DDX41-219ENST00000629036 ITIH3Q06033 890 aa12□□□□□ -0.49
DDX41-219ENST00000629036 PDXDC1Q6P996 788 aa12□□□□□ -0.49
DDX41-219ENST00000629036 C15orf39Q6ZRI6 1047 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms