RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 UBE3BQ7Z3V4 1068 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 MIER2Q8N344 545 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 KAT5Q92993 513 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 COA7Q96BR5 231 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 MYOCQ99972 504 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 TEX101Q9BY14 249 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 AASDHPPTQ9NRN7 309 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 TYW1Q9NV66 732 aaKnown RBP4.39□□□□□ -1.71
VBP1-204ENST00000625964 SLC23A1Q9UHI7 598 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 LUC7L2Q9Y383 392 aaKnown RBP4.39□□□□□ -1.71
VBP1-204ENST00000625964 USP15Q9Y4E8 981 aaPredicted RBP4.39□□□□□ -1.71
VBP1-204ENST00000625964 IPPQ9Y573 584 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 DRGXA6NNA5 263 aa4.38□□□□□ -1.71
VBP1-204ENST00000625964 KIAA0391O15091 583 aaKnown RBP4.38□□□□□ -1.71
VBP1-204ENST00000625964 POMCP01189 267 aa4.38□□□□□ -1.71
VBP1-204ENST00000625964 PDGFRBP09619 1106 aa4.38□□□□□ -1.71
VBP1-204ENST00000625964 EDNRBP24530 442 aa4.38□□□□□ -1.71
VBP1-204ENST00000625964 CDC42EP1Q00587 391 aa4.38□□□□□ -1.71
VBP1-204ENST00000625964 TARDBPQ13148 414 aaKnown RBP eCLIP4.38□□□□□ -1.71
VBP1-204ENST00000625964 ATP2B3Q16720 1220 aa4.38□□□□□ -1.71
VBP1-204ENST00000625964 Q6ZNX1 250 aa4.38□□□□□ -1.71
VBP1-204ENST00000625964 ALOXE3Q9BYJ1 711 aa4.38□□□□□ -1.71
VBP1-204ENST00000625964 FOXJ2Q9P0K8 574 aa4.38□□□□□ -1.71
VBP1-204ENST00000625964 TCRBV7S2A1N4TA0A589 114 aa4.37□□□□□ -1.71
VBP1-204ENST00000625964 ZRANB2O95218 330 aaKnown RBP eCLIP4.37□□□□□ -1.71
VBP1-204ENST00000625964 IL33O95760 270 aa4.37□□□□□ -1.71
VBP1-204ENST00000625964 ATP8B2P98198 1209 aa4.37□□□□□ -1.71
VBP1-204ENST00000625964 PPP4R3AQ6IN85 833 aa4.37□□□□□ -1.71
VBP1-204ENST00000625964 CRELD2Q6UXH1 353 aaPredicted RBP4.37□□□□□ -1.71
VBP1-204ENST00000625964 SEM1Q6ZVN7 128 aa4.37□□□□□ -1.71
VBP1-204ENST00000625964 STAG1Q8WVM7 1258 aa4.37□□□□□ -1.71
VBP1-204ENST00000625964 FUBP1Q96AE4 644 aaKnown RBP4.37□□□□□ -1.71
VBP1-204ENST00000625964 NEU1Q99519 415 aa4.37□□□□□ -1.71
VBP1-204ENST00000625964 REXO4Q9GZR2 422 aaKnown RBP4.37□□□□□ -1.71
VBP1-204ENST00000625964 C11orf54Q9H0W9 315 aaPredicted RBP4.37□□□□□ -1.71
VBP1-204ENST00000625964 FBXO34Q9NWN3 711 aa4.37□□□□□ -1.71
VBP1-204ENST00000625964 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.37□□□□□ -1.71
VBP1-204ENST00000625964 WDR91A4D1P6 747 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 SGTAO43765 313 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 ALDH1L1O75891 902 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 CFIP05156 583 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 ALAS1P13196 640 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 SLC6A2P23975 617 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 CTXN1P60606 82 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 SCAPQ12770 1279 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 UBXN2BQ14CS0 331 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 SPDYE7PQ495Y7 208 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 TMEM240Q5SV17 173 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 FAM102AQ5T9C2 384 aaPredicted RBP4.36□□□□□ -1.71
VBP1-204ENST00000625964 TSHZ3Q63HK5 1081 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 ZNF788Q6ZQV5 615 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 GADL1Q6ZQY3 521 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 CPA6Q8N4T0 437 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 OR56A1Q8NGH5 318 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 HOOK2Q96ED9 719 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 PDLIM2Q96JY6 352 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 CLPTM1LQ96KA5 538 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 Q96MF0 132 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 ADGRE3Q9BY15 652 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 LRIT1Q9P2V4 623 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 IP6K2Q9UHH9 426 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 ATP11BQ9Y2G3 1177 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 CFAP20Q9Y6A4 193 aaKnown RBP4.36□□□□□ -1.71
VBP1-204ENST00000625964 CDHR4A6H8M9 788 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 DTNBO60941 627 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 RPLP2P05387 115 aaKnown RBP4.36□□□□□ -1.71
VBP1-204ENST00000625964 CT47B1P0C2W7 299 aaPredicted RBP4.36□□□□□ -1.71
VBP1-204ENST00000625964 TTF1Q15361 905 aaPredicted RBP4.36□□□□□ -1.71
VBP1-204ENST00000625964 AGAP9Q5VTM2 703 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 METRNLQ641Q3 311 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 RHOT2Q8IXI1 618 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 DCBLD1Q8N8Z6 715 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 IFI44Q8TCB0 444 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 HSPBAP1Q96EW2 488 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 HEPHQ9BQS7 1158 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 KLK15Q9H2R5 256 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 ARPP21Q9UBL0 812 aaPredicted RBP4.36□□□□□ -1.71
VBP1-204ENST00000625964 MAP3K2Q9Y2U5 619 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 PCDHB1Q9Y5F3 818 aa4.36□□□□□ -1.71
VBP1-204ENST00000625964 GRM6O15303 877 aa4.35□□□□□ -1.71
VBP1-204ENST00000625964 ZNF280AP59817 542 aaPredicted RBP4.35□□□□□ -1.71
VBP1-204ENST00000625964 MRPS35P82673 323 aaKnown RBP4.35□□□□□ -1.71
VBP1-204ENST00000625964 RAB39AQ14964 217 aa4.35□□□□□ -1.71
VBP1-204ENST00000625964 KLHL22Q53GT1 634 aa4.35□□□□□ -1.71
VBP1-204ENST00000625964 DACT2Q5SW24 774 aa4.35□□□□□ -1.71
VBP1-204ENST00000625964 GPR149Q86SP6 731 aa4.35□□□□□ -1.71
VBP1-204ENST00000625964 TTC7BQ86TV6 843 aa4.35□□□□□ -1.71
VBP1-204ENST00000625964 ZSWIM1Q9BR11 485 aa4.35□□□□□ -1.71
VBP1-204ENST00000625964 GSTO2Q9H4Y5 243 aa4.35□□□□□ -1.71
VBP1-204ENST00000625964 KLHL11Q9NVR0 708 aa4.35□□□□□ -1.71
VBP1-204ENST00000625964 TRIM38O00635 465 aa4.34□□□□□ -1.71
VBP1-204ENST00000625964 MGST3O14880 152 aa4.34□□□□□ -1.71
VBP1-204ENST00000625964 HAUS5O94927 633 aa4.34□□□□□ -1.71
VBP1-204ENST00000625964 PRSS23O95084 383 aa4.34□□□□□ -1.71
VBP1-204ENST00000625964 CD1AP06126 327 aa4.34□□□□□ -1.71
VBP1-204ENST00000625964 PF4V1P10720 104 aa4.34□□□□□ -1.71
VBP1-204ENST00000625964 MTHFD1P11586 935 aaKnown RBP4.34□□□□□ -1.71
VBP1-204ENST00000625964 PTGER1P34995 402 aa4.34□□□□□ -1.71
VBP1-204ENST00000625964 TLE1Q04724 770 aa4.34□□□□□ -1.71
VBP1-204ENST00000625964 CATIPQ7Z7H3 387 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms