RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 PTP4A2Q12974 167 aa21.01■□□□□ 0.95
PCDHB11-202ENST00000624887 C2CD6Q53TS8 623 aa21.01■□□□□ 0.95
PCDHB11-202ENST00000624887 IFNLR1Q8IU57 520 aaPredicted RBP21.01■□□□□ 0.95
PCDHB11-202ENST00000624887 CEP120Q8N960 986 aa21.01■□□□□ 0.95
PCDHB11-202ENST00000624887 AFG1LQ8WV93 481 aa21.01■□□□□ 0.95
PCDHB11-202ENST00000624887 C18orf8Q96DM3 657 aa21.01■□□□□ 0.95
PCDHB11-202ENST00000624887 DPH5Q9H2P9 285 aa21.01■□□□□ 0.95
PCDHB11-202ENST00000624887 MRPL47Q9HD33 250 aaKnown RBP21.01■□□□□ 0.95
PCDHB11-202ENST00000624887 CISHQ9NSE2 258 aa21.01■□□□□ 0.95
PCDHB11-202ENST00000624887 RASAL2Q9UJF2 1139 aa21.01■□□□□ 0.95
PCDHB11-202ENST00000624887 IL18RAPO95256 599 aa21■□□□□ 0.95
PCDHB11-202ENST00000624887 TNNC2P02585 160 aa21■□□□□ 0.95
PCDHB11-202ENST00000624887 PTGIRP43119 386 aa21■□□□□ 0.95
PCDHB11-202ENST00000624887 MKRN3Q13064 507 aaKnown RBP21■□□□□ 0.95
PCDHB11-202ENST00000624887 SIX1Q15475 284 aaPredicted RBP21■□□□□ 0.95
PCDHB11-202ENST00000624887 PLEKHA7Q6IQ23 1121 aa21■□□□□ 0.95
PCDHB11-202ENST00000624887 LLGL2Q6P1M3 1020 aa21■□□□□ 0.95
PCDHB11-202ENST00000624887 PHLDB2Q86SQ0 1253 aa21■□□□□ 0.95
PCDHB11-202ENST00000624887 ANKRD36BP1Q96IX9 119 aa21■□□□□ 0.95
PCDHB11-202ENST00000624887 XYLT2Q9H1B5 865 aa21■□□□□ 0.95
PCDHB11-202ENST00000624887 COL1A2P08123 1366 aa21■□□□□ 0.95
PCDHB11-202ENST00000624887 TCRBV7S2A1N4TA0A589 114 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 DCAF8L1A6NGE4 600 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 PROSCO94903 275 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 SNAI1O95863 264 aaPredicted RBP20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 KRT14P02533 472 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 HSD17B3P37058 310 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 ADCYAP1R1P41586 468 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 OSTNP61366 133 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 MAMLD1Q13495 774 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 KCTD19Q17RG1 926 aaPredicted RBP20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 ZNF699Q32M78 642 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 TTMPQ5BVD1 217 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 CST9Q5W186 159 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 CDR2LQ86X02 465 aaPredicted RBP20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 ARL8AQ96BM9 186 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 RUNDC3BQ96NL0 473 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 C16orf70Q9BSU1 422 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 RPF1Q9H9Y2 349 aaKnown RBP20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 SCINQ9Y6U3 715 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 MGAMO43451 1857 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 FSCN2O14926 492 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 PPFIA4O75335 1185 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 ITGBL1O95965 494 aaPredicted RBP20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 CAPN2P17655 700 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 SSTR3P32745 418 aaPredicted RBP20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 TTC27Q6P3X3 843 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 CCDC137Q6PK04 289 aaKnown RBP20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 LRIG3Q6UXM1 1119 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 MMS22LQ6ZRQ5 1243 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 C12orf50Q8NA57 414 aaPredicted RBP20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 TRIM31Q9BZY9 425 aa20.99■□□□□ 0.95
PCDHB11-202ENST00000624887 GPR25O00155 361 aa20.98■□□□□ 0.95
PCDHB11-202ENST00000624887 PODXLO00592 558 aa20.98■□□□□ 0.95
PCDHB11-202ENST00000624887 LSM8O95777 96 aaKnown RBP20.98■□□□□ 0.95
PCDHB11-202ENST00000624887 CXCL8P10145 99 aa20.98■□□□□ 0.95
PCDHB11-202ENST00000624887 RARAP10276 462 aa20.98■□□□□ 0.95
PCDHB11-202ENST00000624887 CD58P19256 250 aa20.98■□□□□ 0.95
PCDHB11-202ENST00000624887 MMP8P22894 467 aa20.98■□□□□ 0.95
PCDHB11-202ENST00000624887 FLT3P36888 993 aa20.98■□□□□ 0.95
PCDHB11-202ENST00000624887 UAP1Q16222 522 aaPredicted RBP20.98■□□□□ 0.95
PCDHB11-202ENST00000624887 AMHR2Q16671 573 aa20.98■□□□□ 0.95
PCDHB11-202ENST00000624887 SPRYD7Q5W111 196 aa20.98■□□□□ 0.95
PCDHB11-202ENST00000624887 C1orf131Q8NDD1 294 aaKnown RBP20.98■□□□□ 0.95
PCDHB11-202ENST00000624887 PLAAQ9Y263 795 aa20.98■□□□□ 0.95
PCDHB11-202ENST00000624887 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.98■□□□□ 0.95
PCDHB11-202ENST00000624887 A0A087WZ62 844 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 ZNF286BP0CG31 522 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 MCF2P10911 925 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 TMOD1P28289 359 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 ASPAP45381 313 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 FNTAP49354 379 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 MTMR3Q13615 1198 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 CHADLQ6NUI6 762 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 TMC3Q7Z5M5 1100 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 GPR142Q7Z601 462 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 TMEM192Q8IY95 271 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 FDXACB1Q9BRP7 624 aaPredicted RBP20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 ZDHHC18Q9NUE0 388 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 AKT3Q9Y243 479 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 COILP38432 576 aaPredicted RBP20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 TNFAIP2Q03169 654 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 GRB14Q14449 540 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 DPP9Q86TI2 863 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 DDX27Q96GQ7 796 aaKnown RBP20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 FMO2Q99518 471 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 LRRC19Q9H756 370 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 PARVAQ9NVD7 372 aa20.97■□□□□ 0.95
PCDHB11-202ENST00000624887 H0YGN5 161 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 H3BRB1 525 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 WEE2P0C1S8 567 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 YWHAEP62258 255 aaKnown RBP20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 MTHFD1LQ6UB35 978 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 ZNF518BQ9C0D4 1074 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 TUT1Q9H6E5 874 aaKnown RBP20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 NFS1Q9Y697 457 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 PSTPIP1O43586 416 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 STAG3L1P0CL83 205 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms