RNA–Protein interactions for RNA: ENST00000624069.3

RPL13A-214, Transcript of ribosomal protein L13a, humanhuman

TSL 1 (best)

Gene RPL13A, Length 1,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-214ENST00000624069 AGPAT3Q9NRZ7 376 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 MIOSQ9NXC5 875 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 CNTN3Q9P232 1028 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 CGNQ9P2M7 1197 aaKnown RBP16.31■□□□□ 0.2
RPL13A-214ENST00000624069 EPS15L1Q9UBC2 864 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 DNAJB4Q9UDY4 337 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 CPSF3Q9UKF6 684 aaKnown RBP16.31■□□□□ 0.2
RPL13A-214ENST00000624069 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
RPL13A-214ENST00000624069 B4GALT3O60512 393 aa16.3■□□□□ 0.2
RPL13A-214ENST00000624069 LILRB3O75022 631 aa16.3■□□□□ 0.2
RPL13A-214ENST00000624069 DDHD2O94830 711 aa16.3■□□□□ 0.2
RPL13A-214ENST00000624069 LDHAP00338 332 aaKnown RBP16.3■□□□□ 0.2
RPL13A-214ENST00000624069 CNPP09543 421 aaKnown RBP16.3■□□□□ 0.2
RPL13A-214ENST00000624069 KLRC2P26717 231 aa16.3■□□□□ 0.2
RPL13A-214ENST00000624069 GBP2P32456 591 aaPredicted RBP16.3■□□□□ 0.2
RPL13A-214ENST00000624069 SLC11A1P49279 550 aa16.3■□□□□ 0.2
RPL13A-214ENST00000624069 ACOT2P49753 483 aa16.3■□□□□ 0.2
RPL13A-214ENST00000624069 SNRPFP62306 86 aaKnown RBP16.3■□□□□ 0.2
RPL13A-214ENST00000624069 DSC1Q08554 894 aa16.3■□□□□ 0.2
RPL13A-214ENST00000624069 TUSC3Q13454 348 aa16.3■□□□□ 0.2
RPL13A-214ENST00000624069 ENOX2Q16206 610 aaKnown RBP16.3■□□□□ 0.2
RPL13A-214ENST00000624069 GPR161Q8N6U8 529 aaKnown RBP16.3■□□□□ 0.2
RPL13A-214ENST00000624069 CMASQ8NFW8 434 aaPredicted RBP16.3■□□□□ 0.2
RPL13A-214ENST00000624069 NXPE3Q969Y0 559 aa16.3■□□□□ 0.2
RPL13A-214ENST00000624069 MYADMQ96S97 322 aa16.3■□□□□ 0.2
RPL13A-214ENST00000624069 CLSTN2Q9H4D0 955 aa16.3■□□□□ 0.2
RPL13A-214ENST00000624069 PCIF1Q9H4Z3 704 aa16.3■□□□□ 0.2
RPL13A-214ENST00000624069 PLEKHA5Q9HAU0 1116 aa16.3■□□□□ 0.2
RPL13A-214ENST00000624069 WDR6Q9NNW5 1121 aaKnown RBP16.3■□□□□ 0.2
RPL13A-214ENST00000624069 SLC38A7Q9NVC3 462 aa16.3■□□□□ 0.2
RPL13A-214ENST00000624069 TRIP11Q15643 1979 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 CACNA1IQ9P0X4 2223 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 TGFB1I1O43294 461 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 KCNE1P15382 129 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 OR1G1P47890 313 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 HSP90AA2PQ14568 343 aaPredicted RBP16.29■□□□□ 0.2
RPL13A-214ENST00000624069 CAMK4Q16566 473 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 SLC10A6Q3KNW5 377 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 XKR4Q5GH76 650 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 ZNF658Q5TYW1 1059 aaPredicted RBP16.29■□□□□ 0.2
RPL13A-214ENST00000624069 COLGALT2Q8IYK4 626 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 SMYD4Q8IYR2 804 aaPredicted RBP16.29■□□□□ 0.2
RPL13A-214ENST00000624069 GPD1LQ8N335 351 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 GUF1Q8N442 669 aaKnown RBP16.29■□□□□ 0.2
RPL13A-214ENST00000624069 FAM212AQ96EL1 285 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 BORCS6Q96GS4 357 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 PPP1R10Q96QC0 940 aaKnown RBP16.29■□□□□ 0.2
RPL13A-214ENST00000624069 FAM213AQ9BRX8 229 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 EMILIN2Q9BXX0 1053 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 NUP62CLQ9H1M0 184 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 CXCL16Q9H2A7 254 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 ARHGEF3Q9NR81 526 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 HSPBP1Q9NZL4 362 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 MAN1B1Q9UKM7 699 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 MAPK8IP1Q9UQF2 711 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 PRG3Q9Y2Y8 225 aaPredicted RBP16.29■□□□□ 0.2
RPL13A-214ENST00000624069 MAP1BP46821 2468 aaKnown RBP16.29■□□□□ 0.2
RPL13A-214ENST00000624069 DENND4AQ7Z401 1863 aa16.29■□□□□ 0.2
RPL13A-214ENST00000624069 SMIM28A0A1B0GU29 152 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 TTC26A0AVF1 554 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 DCDC2BA2VCK2 349 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 GOLGA8IPA6NC78 632 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 CASTOR2A6NHX0 329 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 GOLGA8JA6NMD2 632 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 CLIC2O15247 247 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 MEFVO15553 781 aaPredicted RBP16.28■□□□□ 0.2
RPL13A-214ENST00000624069 EXTL3O43909 919 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 LRRN2O75325 713 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 MBD3O95983 291 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 CYP2J2P51589 502 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 POU5F1Q01860 360 aaKnown RBP16.28■□□□□ 0.2
RPL13A-214ENST00000624069 ZNF528Q3MIS6 628 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 ALKAL1Q6UXT8 129 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 BRSK2Q8IWQ3 736 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 CD302Q8IX05 232 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 C12orf56Q8IXR9 622 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 KIF12Q96FN5 646 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 RHOBTB2Q9BYZ6 727 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 FOXQ1Q9C009 403 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 NCDNQ9UBB6 729 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 FAN1Q9Y2M0 1017 aa16.28■□□□□ 0.2
RPL13A-214ENST00000624069 PDCD11Q14690 1871 aaKnown RBP16.28■□□□□ 0.2
RPL13A-214ENST00000624069 CCDC195A0A1B0GUA6 201 aa16.27■□□□□ 0.2
RPL13A-214ENST00000624069 LACTBL1A8MY62 500 aa16.27■□□□□ 0.2
RPL13A-214ENST00000624069 PRR5-ARHGAP8B1AHC4 643 aa16.27■□□□□ 0.2
RPL13A-214ENST00000624069 BIN1O00499 593 aa16.27■□□□□ 0.2
RPL13A-214ENST00000624069 PDXKO00764 312 aa16.27■□□□□ 0.2
RPL13A-214ENST00000624069 NRP1O14786 923 aa16.27■□□□□ 0.2
RPL13A-214ENST00000624069 XPOTO43592 962 aaKnown RBP16.27■□□□□ 0.2
RPL13A-214ENST00000624069 CALUO43852 315 aaPredicted RBP16.27■□□□□ 0.2
RPL13A-214ENST00000624069 IL18RAPO95256 599 aa16.27■□□□□ 0.2
RPL13A-214ENST00000624069 ALDH2P05091 517 aa16.27■□□□□ 0.2
RPL13A-214ENST00000624069 ADRB1P08588 477 aa16.27■□□□□ 0.2
RPL13A-214ENST00000624069 STARD6P59095 220 aa16.27■□□□□ 0.2
RPL13A-214ENST00000624069 ARHGAP8P85298 464 aa16.27■□□□□ 0.2
RPL13A-214ENST00000624069 STIM1Q13586 685 aa16.27■□□□□ 0.2
RPL13A-214ENST00000624069 NAB2Q15742 525 aa16.27■□□□□ 0.2
RPL13A-214ENST00000624069 DCLRE1AQ6PJP8 1040 aa16.27■□□□□ 0.2
RPL13A-214ENST00000624069 CYP26C1Q6V0L0 522 aa16.27■□□□□ 0.2
RPL13A-214ENST00000624069 PJA1Q8NG27 643 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms