RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	FBXL5	Q9UKA1	691 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	AGO2	Q9UKV8	859 aa	Known RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	ODF2L	Q9ULJ1	636 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	PCDHA7	Q9UN72	937 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	ZDHHC9	Q9Y397	364 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	SRPRB	Q9Y5M8	271 aa	Known RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	IRAK3	Q9Y616	596 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	KIAA1549L	Q6ZVL6	1849 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	GVINP1	Q7Z2Y8	2422 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	CEP250	Q9BV73	2442 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	TTC26	A0AVF1	554 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	KRBA1	A5PL33	1030 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	BMP15	O95972	392 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	LRG1	P02750	347 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	ITGB3	P05106	788 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	DCN	P07585	359 aa	Known RBP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	RHO	P08100	348 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	CLTA	P09496	248 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	KCNE1	P15382	129 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	HOXD13	P35453	343 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	PLA2G5	P39877	138 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	VIPR2	P41587	438 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	RAP1GAP	P47736	663 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	SOX9	P48436	509 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	NASP	P49321	788 aa	Predicted RBP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	ZNF131	P52739	623 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	PSMC1	P62191	440 aa	Known RBP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	NHLH1	Q02575	133 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	SIGLEC14	Q08ET2	396 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	IFRD2	Q12894	506 aa	Predicted RBP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	ORC1	Q13415	861 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	E2F4	Q16254	413 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	PABPC1L	Q4VXU2	614 aa	Known RBP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	SLC39A12	Q504Y0	691 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	C9orf57	Q5W0N0	161 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	WSCD1	Q658N2	575 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	ZNF280D	Q6N043	979 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	ARMCX5	Q6P1M9	558 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	LILRA6	Q6PI73	481 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	DCLRE1A	Q6PJP8	1040 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	ZPBP2	Q6X784	338 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	PPFIBP1	Q86W92	1011 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	OSTM1	Q86WC4	334 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	CBWD2	Q8IUF1	395 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	NPAS3	Q8IXF0	933 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	SMYD4	Q8IYR2	804 aa	Predicted RBP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	ATAD1	Q8NBU5	361 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	OR5B17	Q8NGF7	314 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	FAM200A	Q8TCP9	573 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	FGF13	Q92913	245 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	ACSF2	Q96CM8	615 aa	Predicted RBP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	RSPRY1	Q96DX4	576 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	EEF2KMT	Q96G04	330 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	ZFYVE19	Q96K21	471 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	SENP8	Q96LD8	212 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	ZSWIM3	Q96MP5	696 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	ZNF396	Q96N95	335 aa	Predicted RBP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	NECTIN4	Q96NY8	510 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	PRKD2	Q9BZL6	878 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	CCSER1	Q9C0I3	900 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	GOLPH3L	Q9H4A5	285 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	SLITRK6	Q9H5Y7	841 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	MMRN2	Q9H8L6	949 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	WDR6	Q9NNW5	1121 aa	Known RBP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	SLC39A2	Q9NP94	309 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	TMLHE	Q9NVH6	421 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	ABI2	Q9NYB9	513 aa	Predicted RBP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	CEP72	Q9P209	647 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	CPSF3	Q9UKF6	684 aa	Known RBP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	SORCS3	Q9UPU3	1222 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	MAPK8IP1	Q9UQF2	711 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	MRPS23	Q9Y3D9	190 aa	Known RBP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	RBM19	Q9Y4C8	960 aa	Known RBP	4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	YIPF1	Q9Y548	306 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	INSL5	Q9Y5Q6	135 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	STK24	Q9Y6E0	443 aa		4.84	□□□□□ -1.63
LINC00649-219	ENST00000622171	GON4L	Q3T8J9	2241 aa		4.84	□□□□□ -1.64
LINC00649-219	ENST00000622171		A0A0B4J269	797 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171		A0A1W2PRU2	124 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	MTMR11	A4FU01	709 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	TMEM189-UBE2V1	I3L0A0	370 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	CYB561D2	O14569	222 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	CUTA	O60888	179 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	ATP2C2	O75185	946 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	PPP1R37	O75864	691 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	DLAT	P10515	647 aa	Known RBP	4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	PFKFB1	P16118	471 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	NPR3	P17342	541 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	ELF1	P32519	619 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	GPC5	P78333	572 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	GTF2B	Q00403	316 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	YWHAH	Q04917	246 aa	Predicted RBP	4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	TCF15	Q12870	199 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	DUSP4	Q13115	394 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	SNW1	Q13573	536 aa	Known RBP	4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	HTR4	Q13639	388 aa		4.83	□□□□□ -1.64
LINC00649-219	ENST00000622171	TEAD2	Q15562	447 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms