RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	TUBA3E	Q6PEY2	450 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ADGRD1	Q6QNK2	874 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CLEC2A	Q6UVW9	174 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	MEX3B	Q6ZN04	569 aa	Known RBP	4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	LIMS2	Q7Z4I7	341 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	SLC51B	Q86UW2	128 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	MAP4K3	Q8IVH8	894 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	APLF	Q8IW19	511 aa	Predicted RBP	4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ANKRD35	Q8N283	1001 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	GALNT15	Q8N3T1	639 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CELF2-AS1	Q8N7Q2	184 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PPM1N	Q8N819	430 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	NIPA2	Q8N8Q9	360 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	FAM71D	Q8N9W8	422 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	OR56B2P	Q8NGI1	322 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TPCN2	Q8NHX9	752 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CDC26	Q8NHZ8	85 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CASP10	Q92851	521 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TMIGD2	Q96BF3	282 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TMA16	Q96EY4	203 aa	Known RBP	4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	UBXN10	Q96LJ8	280 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CCDC138	Q96M89	665 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TBCD	Q9BTW9	1192 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	KIFC3	Q9BVG8	833 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	MXD3	Q9BW11	206 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ADNP	Q9H2P0	1102 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CCDC87	Q9NVE4	849 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	DDX20	Q9UHI6	824 aa	Known RBP	4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PTPN22	Q9Y2R2	807 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PCDHGB5	Q9Y5G0	923 aa		4.36	□□□□□ -1.71
UBE2D3-233	ENST00000618836	HEATR9	A2RTY3	570 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	HEXB	P07686	556 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	GALT	P07902	379 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	IL11	P20809	199 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	IL32	P24001	234 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PPARG	P37231	505 aa	Predicted RBP	4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CETN2	P41208	172 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ARSD	P51689	593 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	THOP1	P52888	689 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PMS1	P54277	932 aa	Known RBP	4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	USP46	P62068	366 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	KDSR	Q06136	332 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	GFPT1	Q06210	699 aa	Predicted RBP	4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	SCRN1	Q12765	414 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PRKG1	Q13976	671 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CYLC2	Q14093	348 aa	Predicted RBP	4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	KCNB1	Q14721	858 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CCDC57	Q2TAC2	916 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TBC1D9B	Q66K14	1250 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	SLC30A6	Q6NXT4	461 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	LHFPL2	Q6ZUX7	228 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	STRA8	Q7Z7C7	330 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ANKMY2	Q8IV38	441 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PCYOX1L	Q8NBM8	494 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	RIN3	Q8TB24	985 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	SPPL3	Q8TCT6	385 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	AGR3	Q8TD06	166 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	MAGEC3	Q8TD91	643 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TTC17	Q96AE7	1141 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ZNF845	Q96IR2	970 aa	Predicted RBP	4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	LENG8	Q96PV6	779 aa	Predicted RBP	4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	DDX50	Q9BQ39	737 aa	Known RBP	4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	LLPH	Q9BRT6	129 aa	Known RBP	4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	EMILIN2	Q9BXX0	1053 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	WDR12	Q9GZL7	423 aa	Known RBP	4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	FBRS	Q9HAH7	460 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TBCCD1	Q9NVR7	557 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ASNSD1	Q9NWL6	643 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	STK32B	Q9NY57	414 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	SATB2	Q9UPW6	733 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PCDHB9	Q9Y5E1	797 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PTCH2	Q9Y6C5	1203 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TNKS	O95271	1327 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	KIF7	Q2M1P5	1343 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TTC41P	Q6P2S7	1318 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836		A0A087WUV0	522 aa	Predicted RBP	4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CCDC78	A2IDD5	438 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836		H0YIV9	168 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ZBTB24	O43167	697 aa	Predicted RBP	4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	SLITRK5	O94991	958 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PRKAR1A	P10644	381 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ALOX12	P18054	663 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	FGFR4	P22455	802 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CYP4F8	P98187	520 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TRPC3	Q13507	836 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TRIM14	Q14142	442 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	NDUFA5	Q16718	116 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CCDC40	Q4G0X9	1142 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	SLC2A7	Q6PXP3	512 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	C3orf62	Q6ZUJ4	267 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	GPR155	Q7Z3F1	870 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	SLC51A	Q86UW1	340 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ZBTB46	Q86UZ6	589 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	NIM1K	Q8IY84	436 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	UBR7	Q8N806	425 aa		4.35	□□□□□ -1.71
UBE2D3-233	ENST00000618836	MFSD2A	Q8NA29	543 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms