RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 OVOS1Q6IE37 1185 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 SLFN12LQ6IEE8 588 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 TRAPPC11Q7Z392 1133 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 APBB1IPQ7Z5R6 666 aaPredicted RBP4.97□□□□□ -1.61
SYCP1-210ENST00000618516 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.97□□□□□ -1.61
SYCP1-210ENST00000618516 SLC39A11Q8N1S5 342 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 ZNF689Q96CS4 500 aaPredicted RBP4.97□□□□□ -1.61
SYCP1-210ENST00000618516 CORO1BQ9BR76 489 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 MED10Q9BTT4 135 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 SMOC2Q9H3U7 446 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 TMEM134Q9H6X4 195 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 MAN1C1Q9NR34 630 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 KCND2Q9NZV8 630 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 NFE2L3Q9Y4A8 694 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 MAP1BP46821 2468 aaKnown RBP4.96□□□□□ -1.61
SYCP1-210ENST00000618516 CACNA1GO43497 2377 aa4.96□□□□□ -1.61
SYCP1-210ENST00000618516 TTC26A0AVF1 554 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 FAM86C2PA6NEL3 165 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 H0YCG3 227 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 CALUO43852 315 aaPredicted RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 HUS1O60921 280 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 ZNF623O75123 536 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 TBX10O75333 385 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 SKIP12755 728 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 CD72P21854 359 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 KCNA4P22459 653 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 AXLP30530 894 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 TNNC1P63316 161 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 PPP3CAQ08209 521 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 HYAL1Q12794 435 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 MTMR3Q13615 1198 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 NCOA4Q13772 614 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 SMC1AQ14683 1233 aaKnown RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 BMS1Q14692 1282 aaKnown RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 DUOXA2Q1HG44 320 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 ZNF699Q32M78 642 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 USP41Q3LFD5 358 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 CBWD6Q4V339 395 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 CBWD3Q5JTY5 395 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 CBWD5Q5RIA9 395 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 ZPBP2Q6X784 338 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 SV2AQ7L0J3 742 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 GRASPQ7Z6J2 395 aaPredicted RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 ACOT1Q86TX2 421 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 DNAAF5Q86Y56 855 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 CMTR2Q8IYT2 770 aaKnown RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 RSAD2Q8WXG1 361 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 P2RX5Q93086 422 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 HLA-CQ95604 372 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 NTPCRQ9BSD7 190 aaKnown RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 CUEDC2Q9H467 287 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 DPEP3Q9H4B8 488 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 CLSTN2Q9H4D0 955 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 TRPC7Q9HCX4 862 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 PTPRHQ9HD43 1115 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 NLRC4Q9NPP4 1024 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 SCUBE2Q9NQ36 999 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 ST7Q9NRC1 585 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 FAM207AQ9NSI2 230 aaPredicted RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 DDX43Q9NXZ2 648 aaKnown RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 KANSL3Q9P2N6 904 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 HMGXB4Q9UGU5 601 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 ARMCX3Q9UH62 379 aaPredicted RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 CPSF3Q9UKF6 684 aaKnown RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 FAM186AA6NE01 2351 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 SYNJ2BP-COX16A0A087WUM0 186 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 CCDC195A0A1B0GUA6 201 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 PVALEFA0A1B0GWK0 134 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 LRRIQ3A6PVS8 624 aaPredicted RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 A8MXQ7 604 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 KPNA7A9QM74 516 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 ABLIM1O14639 778 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 TGM5O43548 720 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 EXTL3O43909 919 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 RHOBTB3O94955 611 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 GLUD1P00367 558 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 RPLP2P05387 115 aaKnown RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 MUTP22033 750 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 BDNFP23560 247 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 CYP2F1P24903 491 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 VAMP7P51809 220 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 FAM189BP81408 668 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 UPP1Q16831 310 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 ZNF658Q5TYW1 1059 aaPredicted RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 TDRD10Q5VZ19 366 aaKnown RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 PTCRAQ6ISU1 281 aaPredicted RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 PASD1Q8IV76 773 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 ZNF516Q92618 1163 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 TATDN2Q93075 761 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 PPP2R3CQ969Q6 453 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 MRPL38Q96DV4 380 aaKnown RBP4.96□□□□□ -1.62
SYCP1-210ENST00000618516 MCRS1Q96EZ8 462 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 IMPG2Q9BZV3 1241 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 ADAM7Q9H2U9 754 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 FANCLQ9NW38 375 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 RMND1Q9NWS8 449 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 SMPD4Q9NXE4 827 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 COX16Q9P0S2 106 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 SEL1LQ9UBV2 794 aa4.96□□□□□ -1.62
SYCP1-210ENST00000618516 UBQLN1Q9UMX0 589 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms