RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	ALG1L2	C9J202	215 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	CYP3A4	P08684	503 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	CSF2RA	P15509	400 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	TFEB	P19484	476 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	CYP7A1	P22680	504 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	RPIA	P49247	311 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	MAP3K12	Q12852	859 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	MXD4	Q14582	209 aa	Predicted RBP	10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	GFOD2	Q3B7J2	385 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	HHIPL2	Q6UWX4	724 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	BEND4	Q6ZU67	534 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	C3orf62	Q6ZUJ4	267 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	FAM47E	Q6ZV65	393 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	SESTD1	Q86VW0	696 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	ATL1	Q8WXF7	558 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	ZC3H10	Q96K80	434 aa	Known RBP	10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	CEP19	Q96LK0	163 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	CCDC138	Q96M89	665 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	SARG	Q9BW04	601 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	NT5C3A	Q9H0P0	336 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	USP40	Q9NVE5	1235 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	GGA3	Q9NZ52	723 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	DDX20	Q9UHI6	824 aa	Known RBP	10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940	KCNH4	Q9UQ05	1017 aa		10.21	□□□□□ -0.78
LRTOMT-222	ENST00000615940		A0A1B0GVG6	124 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	TCRBV5S4A2T	A0A5A2	114 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	CAPN14	A8MX76	684 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	PPP1R3G	B7ZBB8	358 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	SPOP	O43791	374 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	NIPSNAP2	O75323	286 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	MICAL2	O94851	1124 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	DNTT	P04053	509 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	TBXAS1	P24557	533 aa	Predicted RBP	10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	BTD	P43251	543 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	VCP	P55072	806 aa	Known RBP	10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	DYNLL1	P63167	89 aa	Known RBP	10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	CSNK2B	P67870	215 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	FMR1	Q06787	632 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	SLC45A4	Q5BKX6	768 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	FBXO48	Q5FWF7	155 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	ANGEL2	Q5VTE6	544 aa	Known RBP	10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	MAP1S	Q66K74	1059 aa	Predicted RBP	10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	ALKBH5	Q6P6C2	394 aa	Known RBP	10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	BORA	Q6PGQ7	559 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	USP50	Q70EL3	339 aa	Predicted RBP	10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	BZW1	Q7L1Q6	419 aa	Known RBP	10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	P3H2	Q8IVL5	708 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	SULF1	Q8IWU6	871 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	HACE1	Q8IYU2	909 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	LILRB4	Q8NHJ6	448 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	CAGE1	Q8TC20	777 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	HDAC11	Q96DB2	347 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	PGBD1	Q96JS3	809 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	EGLN2	Q96KS0	407 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	TCEANC2	Q96MN5	208 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	ZDHHC15	Q96MV8	337 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	DDX50	Q9BQ39	737 aa	Known RBP	10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	RAD21L1	Q9H4I0	556 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	LIN28A	Q9H9Z2	209 aa	Known RBP	10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	ZFAT	Q9P243	1243 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	DPP7	Q9UHL4	492 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	BAG5	Q9UL15	447 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	SIPA1L1	O43166	1804 aa		10.2	□□□□□ -0.78
LRTOMT-222	ENST00000615940	CTAGE9	A4FU28	777 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	SLC9B1P1	A6NJY1	282 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	C16orf96	A6NNT2	1141 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	KPNA5	O15131	536 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	ZSCAN12	O43309	604 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	FSBP	O95073	299 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	LCA5L	O95447	670 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	EIF2S1	P05198	315 aa	Known RBP	10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	SLC3A2	P08195	630 aa	Known RBP	10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	SDS	P20132	328 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	SERPINB6	P35237	376 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	AARS	P49588	968 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	TMPRSS15	P98073	1019 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	MPP1	Q00013	466 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	CENPC	Q03188	943 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	ARL13B	Q3SXY8	428 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	ARHGAP29	Q52LW3	1261 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	FAM102B	Q5T8I3	360 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	NUP54	Q7Z3B4	507 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	VSIG1	Q86XK7	387 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	KCTD13	Q8WZ19	329 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	YME1L1	Q96TA2	773 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	SEC62	Q99442	399 aa	Known RBP	10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	HAUS8	Q9BT25	410 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	KIFC3	Q9BVG8	833 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	NUSAP1	Q9BXS6	441 aa	Known RBP	10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	GLRX2	Q9NS18	164 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	ZNF180	Q9UJW8	692 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	SSUH2	Q9Y2M2	353 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	CHURC1-FNTB	B4DL54	471 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	CAPN9	O14815	690 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	GSTT2	P0CG29	244 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	GSTT2B	P0CG30	244 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	ALDH3A1	P30838	453 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	PPFIA1	Q13136	1202 aa		10.19	□□□□□ -0.78
LRTOMT-222	ENST00000615940	KRTCAP3	Q53RY4	240 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms