RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 FEZ2Q9UHY8 353 aaPredicted RBP6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 NEU2Q9Y3R4 380 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 COL4A3Q01955 1670 aa6.51□□□□□ -1.37
SCAMP1-205ENST00000614488 A0A087X1B8 175 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 ERN1O75460 977 aaKnown RBP6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 OFD1O75665 1012 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 RHOBTB3O94955 611 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 PRDX5P30044 214 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 MAP2K6P52564 334 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 VAV2P52735 878 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 SCAPQ12770 1279 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 HEATR3Q7Z4Q2 680 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 FAM90A1Q86YD7 464 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 COLGALT2Q8IYK4 626 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 LCORLQ8N3X6 602 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 Q8NA96 180 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 JPH3Q8WXH2 748 aaPredicted RBP6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 TLR10Q9BXR5 811 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 IKZF4Q9H2S9 585 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 SYBUQ9NX95 663 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 CFAP97Q9P2B7 532 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 CDYLQ9Y232 598 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 THRAP3Q9Y2W1 955 aaKnown RBP6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 PCDHA3Q9Y5H8 950 aa6.5□□□□□ -1.37
SCAMP1-205ENST00000614488 A0A1W2PS29 197 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 S100BP04271 92 aaPredicted RBP6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 HKR1P10072 659 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 PIK3CGP48736 1102 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 USP14P54578 494 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 POU6F2P78424 691 aaPredicted RBP6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 PIGFQ07326 219 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 ZNF844Q08AG5 666 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 IFIT1BQ5T764 474 aaKnown RBP6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 HECTD2Q5U5R9 776 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 TMIEQ8NEW7 156 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 LINC00476Q8WZB0 136 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 SCAMP4Q969E2 229 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 NACC2Q96BF6 587 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 C1GALT1C1Q96EU7 318 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 TOR3AQ9H497 397 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 BRD9Q9H8M2 597 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 NMRK2Q9NPI5 230 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 LMBRD1Q9NUN5 540 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 ZIM2Q9NZV7 527 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 ABCF2Q9UG63 623 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 ZDHHC8Q9ULC8 765 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 SLC45A2Q9UMX9 530 aa6.49□□□□□ -1.37
SCAMP1-205ENST00000614488 CHEK2O96017 543 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 GCP02774 474 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 ITGAMP11215 1152 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 TYRP14679 529 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 KCNA2P16389 499 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 FDXRP22570 491 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 KIF22Q14807 665 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 CLNKQ7Z7G1 428 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 GPR149Q86SP6 731 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 BEND2Q8NDZ0 799 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 SUPT20HQ8NEM7 779 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 KRTAP9-8Q9BYQ0 159 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 IMPG2Q9BZV3 1241 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 UNKLQ9H9P5 680 aaKnown RBP6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 GPR35Q9HC97 309 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 TBCCD1Q9NVR7 557 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 PACSIN3Q9UKS6 424 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 DMRT1Q9Y5R6 373 aa6.48□□□□□ -1.37
SCAMP1-205ENST00000614488 PRAMEF33A0A0G2JMD5 474 aa6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 PRAMEF10O60809 474 aa6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 ZFPL1O95159 310 aa6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 GJB1P08034 283 aa6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 HSPA6P17066 643 aa6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 GTF2H3Q13889 308 aa6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 GEN1Q17RS7 908 aa6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 SP5Q6BEB4 398 aaPredicted RBP6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 GRAMD1CQ8IYS0 662 aa6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 CFAP52Q8N1V2 620 aa6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 PDPRQ8NCN5 879 aa6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 DIS3LQ8TF46 1054 aaKnown RBP6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 CDK5RAP3Q96JB5 506 aa6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 MRPL46Q9H2W6 279 aaKnown RBP6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 PNPOQ9NVS9 261 aa6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 CTTNBP2NLQ9P2B4 639 aa6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 TESQ9UGI8 421 aaKnown RBP6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 STXBP5LQ9Y2K9 1186 aa6.47□□□□□ -1.37
SCAMP1-205ENST00000614488 CCDC195A0A1B0GUA6 201 aa6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 E7ENX8 843 aa6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 E9PLN8 166 aa6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 MATN4O95460 622 aa6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 U2AF1L5P0DN76 240 aaPredicted RBP6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 RARBP10826 455 aa6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 PROZP22891 400 aa6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 NKX6-1P78426 367 aaPredicted RBP6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 U2AF1Q01081 240 aaKnown RBP eCLIP6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 TAP2Q03519 686 aa6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 FSTL1Q12841 308 aa6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 CXorf57Q6NSI4 855 aaKnown RBP6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 SLC17A8Q8NDX2 589 aa6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 AGAP2Q99490 1192 aa6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 VKORC1Q9BQB6 163 aa6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 C1orf43Q9BWL3 253 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms