RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 TRIM49P0CI25 452 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 TRIM49CP0CI26 452 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 ATICP31939 592 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 TYRO3Q06418 890 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 MAPK8IP2Q13387 824 aaPredicted RBP14.28□□□□□ -0.12
MDC1-209ENST00000613547 SKIV2LQ15477 1246 aaKnown RBP14.28□□□□□ -0.12
MDC1-209ENST00000613547 TCEAL5Q5H9L2 206 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 RTP2Q5QGT7 225 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 KIAA0319Q5VV43 1072 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 CD300LGQ6UXG3 332 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 RBM23Q86U06 439 aaKnown RBP14.28□□□□□ -0.12
MDC1-209ENST00000613547 METTL23Q86XA0 190 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 CCDC150Q8NCX0 1101 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 MAFAQ8NHW3 353 aaPredicted RBP14.28□□□□□ -0.12
MDC1-209ENST00000613547 PPM1EQ8WY54 764 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 BORCS6Q96GS4 357 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 HPDLQ96IR7 371 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 FAM84AQ96KN4 292 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 B3GALT6Q96L58 329 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 SENP8Q96LD8 212 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 IMPG2Q9BZV3 1241 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 MMRN2Q9H8L6 949 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 TMEM8AQ9HCN3 771 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 SIX4Q9UIU6 781 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 DSEQ9UL01 958 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 PCDHGC5Q9Y5F6 944 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 HIDE1A8MVS5 230 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 SPTLC1O15269 473 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 C4BPAP04003 597 aaKnown RBP14.27□□□□□ -0.13
MDC1-209ENST00000613547 ADH1AP07327 375 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 SRGAP2BP0DMP2 458 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 TYMPP19971 482 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 IGFBP6P24592 240 aaPredicted RBP14.27□□□□□ -0.13
MDC1-209ENST00000613547 KLRC2P26717 231 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 TKTP29401 623 aaKnown RBP14.27□□□□□ -0.13
MDC1-209ENST00000613547 PIK3CAP42336 1068 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 GCLMP48507 274 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 NRIP1P48552 1158 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 NDUFV1P49821 464 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 MXI1P50539 228 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 YWHAHQ04917 246 aaPredicted RBP14.27□□□□□ -0.13
MDC1-209ENST00000613547 NCOA4Q13772 614 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 CCDC85BQ15834 202 aaPredicted RBP14.27□□□□□ -0.13
MDC1-209ENST00000613547 PSMD5Q16401 504 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 ZACNQ401N2 412 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 TDRD10Q5VZ19 366 aaKnown RBP14.27□□□□□ -0.13
MDC1-209ENST00000613547 KRT39Q6A163 491 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 ZNF280DQ6N043 979 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 SV2AQ7L0J3 742 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 PPFIBP1Q86W92 1011 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 TMEM130Q8N3G9 435 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 CXorf38Q8TB03 319 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 ZNF516Q92618 1163 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 OXCT2Q9BYC2 517 aaPredicted RBP14.27□□□□□ -0.13
MDC1-209ENST00000613547 THAP9Q9H5L6 903 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 RXFP1Q9HBX9 757 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 FNIP2Q9P278 1114 aa14.27□□□□□ -0.13
MDC1-209ENST00000613547 MAGEC2Q9UBF1 373 aaPredicted RBP14.27□□□□□ -0.13
MDC1-209ENST00000613547 SYCE3A1L190 88 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 CYB561D2O14569 222 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 CNPP09543 421 aaKnown RBP14.26□□□□□ -0.13
MDC1-209ENST00000613547 MARSP56192 900 aaKnown RBP14.26□□□□□ -0.13
MDC1-209ENST00000613547 MCCD1P59942 119 aaPredicted RBP14.26□□□□□ -0.13
MDC1-209ENST00000613547 MYL6P60660 151 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 PPP3CAQ08209 521 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 CETN1Q12798 172 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 ZNF699Q32M78 642 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 VARS2Q5ST30 1063 aaKnown RBP14.26□□□□□ -0.13
MDC1-209ENST00000613547 C1orf220Q5T0J3 134 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 ELMSAN1Q6PJG2 1045 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 PRSS55Q6UWB4 352 aaPredicted RBP14.26□□□□□ -0.13
MDC1-209ENST00000613547 DPH6Q7L8W6 267 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 ADGRD2Q7Z7M1 963 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 CREBRFQ8IUR6 639 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 LNX1Q8TBB1 728 aaPredicted RBP14.26□□□□□ -0.13
MDC1-209ENST00000613547 ENOX1Q8TC92 643 aaKnown RBP14.26□□□□□ -0.13
MDC1-209ENST00000613547 TAF4BQ92750 862 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 CNOT6LQ96LI5 555 aaKnown RBP14.26□□□□□ -0.13
MDC1-209ENST00000613547 KLHL5Q96PQ7 755 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 DNAJC25Q9H1X3 360 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 IGFLR1Q9H665 355 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 SNX9Q9Y5X1 595 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 BACE2Q9Y5Z0 518 aa14.26□□□□□ -0.13
MDC1-209ENST00000613547 CHD7Q9P2D1 2997 aa14.25□□□□□ -0.13
MDC1-209ENST00000613547 PER2O15055 1255 aa14.25□□□□□ -0.13
MDC1-209ENST00000613547 TEX28O15482 410 aa14.25□□□□□ -0.13
MDC1-209ENST00000613547 LILRB3O75022 631 aa14.25□□□□□ -0.13
MDC1-209ENST00000613547 N4BP1O75113 896 aaKnown RBP14.25□□□□□ -0.13
MDC1-209ENST00000613547 STAU1O95793 577 aaKnown RBP14.25□□□□□ -0.13
MDC1-209ENST00000613547 CST3P01034 146 aaPredicted RBP14.25□□□□□ -0.13
MDC1-209ENST00000613547 CYP11A1P05108 521 aa14.25□□□□□ -0.13
MDC1-209ENST00000613547 P4HA1P13674 534 aa14.25□□□□□ -0.13
MDC1-209ENST00000613547 TNNC1P63316 161 aa14.25□□□□□ -0.13
MDC1-209ENST00000613547 MYL5Q02045 173 aa14.25□□□□□ -0.13
MDC1-209ENST00000613547 HYAL1Q12794 435 aa14.25□□□□□ -0.13
MDC1-209ENST00000613547 DUSP6Q16828 381 aa14.25□□□□□ -0.13
MDC1-209ENST00000613547 SGSM1Q2NKQ1 1148 aa14.25□□□□□ -0.13
MDC1-209ENST00000613547 WDR72Q3MJ13 1102 aa14.25□□□□□ -0.13
MDC1-209ENST00000613547 CTXN3Q4LDR2 81 aa14.25□□□□□ -0.13
MDC1-209ENST00000613547 ZNF667Q5HYK9 610 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms