RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 NOP14P78316 857 aaKnown RBP9.57□□□□□ -0.88
CCDC47-207ENST00000612558 HTRA3P83110 453 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 TRPC3Q13507 836 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 CUL2Q13617 745 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 SLC10A6Q3KNW5 377 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 RPAINQ86UA6 219 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 NT5DC4Q86YG4 428 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 GLYCTKQ8IVS8 523 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 EFCAB13Q8IY85 973 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 TRIM58Q8NG06 486 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 OLIG1Q8TAK6 271 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 LNX1Q8TBB1 728 aaPredicted RBP9.57□□□□□ -0.88
CCDC47-207ENST00000612558 EPS8L1Q8TE68 723 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 ZNF296Q8WUU4 475 aaPredicted RBP9.57□□□□□ -0.88
CCDC47-207ENST00000612558 DHX38Q92620 1227 aaKnown RBP9.57□□□□□ -0.88
CCDC47-207ENST00000612558 CCDC94Q9BW85 323 aaPredicted RBP9.57□□□□□ -0.88
CCDC47-207ENST00000612558 CELF4Q9BZC1 486 aaKnown RBP9.57□□□□□ -0.88
CCDC47-207ENST00000612558 MROH7Q68CQ1 1323 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 CITO14578 2027 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 BTNL10A8MVZ5 291 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 WIPF1O43516 503 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 TACC1O75410 805 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 SGPL1O95470 568 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 NPTXRO95502 500 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 H2AFZP0C0S5 128 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 BPIFB4P59827 614 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 MYL6P60660 151 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 MRPS6P82932 125 aaKnown RBP9.56□□□□□ -0.88
CCDC47-207ENST00000612558 TUBB2AQ13885 445 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 FAM47CQ5HY64 1035 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 JADE1Q6IE81 842 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 SPOPLQ6IQ16 392 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 GDF6Q6KF10 455 aaPredicted RBP9.56□□□□□ -0.88
CCDC47-207ENST00000612558 H2AFVQ71UI9 128 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 SERINC5Q86VE9 423 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 U2AF1L4Q8WU68 220 aaKnown RBP9.56□□□□□ -0.88
CCDC47-207ENST00000612558 TMEM40Q8WWA1 233 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 TAF4BQ92750 862 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 ELMO3Q96BJ8 720 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 NOX5Q96PH1 765 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 NAPGQ99747 312 aaPredicted RBP9.56□□□□□ -0.88
CCDC47-207ENST00000612558 TUBB2BQ9BVA1 445 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 PLEKHA5Q9HAU0 1116 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 APOBEC3GQ9HC16 384 aaKnown RBP9.56□□□□□ -0.88
CCDC47-207ENST00000612558 PRDM9Q9NQV7 894 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 NUB1Q9Y5A7 615 aa9.56□□□□□ -0.88
CCDC47-207ENST00000612558 MEFVO15553 781 aaPredicted RBP9.55□□□□□ -0.88
CCDC47-207ENST00000612558 CLSTN1O94985 981 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 INHAP05111 366 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 NFICP08651 508 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 KRT5P13647 590 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 CYP11B1P15538 503 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 GRK4P32298 578 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 GTF2F1P35269 517 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCDC47-207ENST00000612558 PDE6CP51160 858 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 PTPN11Q06124 597 aaPredicted RBP9.55□□□□□ -0.88
CCDC47-207ENST00000612558 NOP9Q86U38 636 aaKnown RBP9.55□□□□□ -0.88
CCDC47-207ENST00000612558 SLC47A2Q86VL8 602 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 RPUSD2Q8IZ73 545 aaKnown RBP9.55□□□□□ -0.88
CCDC47-207ENST00000612558 SLC20A1Q8WUM9 679 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 FAXDC2Q96IV6 333 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 ALS2CR12Q96Q35 445 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 ARID3AQ99856 593 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 TSEN34Q9BSV6 310 aaKnown RBP9.55□□□□□ -0.88
CCDC47-207ENST00000612558 PACSIN1Q9BY11 444 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 TRIM6Q9C030 488 aaPredicted RBP9.55□□□□□ -0.88
CCDC47-207ENST00000612558 HMX1Q9NP08 348 aaPredicted RBP9.55□□□□□ -0.88
CCDC47-207ENST00000612558 SEPT11Q9NVA2 429 aaKnown RBP9.55□□□□□ -0.88
CCDC47-207ENST00000612558 NOCTQ9UK39 431 aaKnown RBP9.55□□□□□ -0.88
CCDC47-207ENST00000612558 CNTN6Q9UQ52 1028 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 PIN4Q9Y237 131 aaKnown RBP9.55□□□□□ -0.88
CCDC47-207ENST00000612558 C2CD2Q9Y426 696 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 TRPV2Q9Y5S1 764 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 PCNTO95613 3336 aa9.55□□□□□ -0.88
CCDC47-207ENST00000612558 A0A0A6YYK5 440 aaPredicted RBP9.54□□□□□ -0.88
CCDC47-207ENST00000612558 ANO9A1A5B4 782 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 MOXD2PA6NHM9 499 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 MOCS3O95396 460 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 GZMAP12544 262 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 CHRNB2P17787 502 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 ACO1P21399 889 aaKnown RBP9.54□□□□□ -0.88
CCDC47-207ENST00000612558 ATICP31939 592 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 ACLYP53396 1101 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 YARSP54577 528 aaKnown RBP9.54□□□□□ -0.88
CCDC47-207ENST00000612558 NAP1L1P55209 391 aaKnown RBP9.54□□□□□ -0.88
CCDC47-207ENST00000612558 CDR2Q01850 454 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 NFX1Q12986 1120 aaKnown RBP9.54□□□□□ -0.88
CCDC47-207ENST00000612558 TMEM132DQ14C87 1099 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 IFI16Q16666 785 aaKnown RBP9.54□□□□□ -0.88
CCDC47-207ENST00000612558 ZNF699Q32M78 642 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 SCARA3Q6AZY7 606 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 ZNF677Q86XU0 584 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 C1orf127Q8N9H9 656 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 EIF2AQ9BY44 585 aaKnown RBP9.54□□□□□ -0.88
CCDC47-207ENST00000612558 NIF3L1Q9GZT8 377 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 XYLT2Q9H1B5 865 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 ATP13A2Q9NQ11 1180 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 SNTG2Q9NY99 539 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 SALL4Q9UJQ4 1053 aa9.54□□□□□ -0.88
CCDC47-207ENST00000612558 DERAQ9Y315 318 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms