RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 GPAT2Q6NUI2 795 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 BTNL9Q6UXG8 535 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 EXOC3L1Q86VI1 746 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 LONP2Q86WA8 852 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 MAP7D3Q8IWC1 876 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 NME8Q8N427 588 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 ATP11CQ8NB49 1132 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 RNF149Q8NC42 400 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 FEZF2Q8TBJ5 459 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 ADPGKQ9BRR6 497 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 HESX1Q9UBX0 185 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 PNMA3Q9UL41 463 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 TRIM33Q9UPN9 1127 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 USH1CQ9Y6N9 552 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 VCAM1P19320 739 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 TBXAS1P24557 533 aaPredicted RBP7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 CAP2P40123 477 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 CDH6P55285 790 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 FMO1Q01740 532 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 NR1H3Q13133 447 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 ITIH4Q14624 930 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 BMT2Q1RMZ1 405 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 CRY2Q49AN0 593 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 FAM102AQ5T9C2 384 aaPredicted RBP7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 FAM160B1Q5W0V3 765 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 FOXR2Q6PJQ5 311 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 SYDE1Q6ZW31 735 aaPredicted RBP7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 YTHDF3Q7Z739 585 aaKnown RBP7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 ZNF354CQ86Y25 554 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 MCOLN2Q8IZK6 566 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 RASGEF1CQ8N431 466 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 CCNYQ8ND76 341 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 SYTL5Q8TDW5 730 aaPredicted RBP7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 SREK1Q8WXA9 508 aaKnown RBP7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 ZBTB45Q96K62 511 aaPredicted RBP7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 TMEM237Q96Q45 408 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 IDI2Q9BXS1 227 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 AGO4Q9HCK5 861 aaKnown RBP7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 NINJ2Q9NZG7 142 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 WHRNQ9P202 907 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 FBXO40Q9UH90 709 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 CNOT7Q9UIV1 285 aaKnown RBP7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 PHTF1Q9UMS5 762 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 AKT3Q9Y243 479 aa7.25□□□□□ -1.25
SYNPO2-206ENST00000610556 IGKV6D-41A0A0C4DH26 115 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 IQANK1A0A1B0GTG1 560 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 NDC80O14777 642 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 ASAP2O43150 1006 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 SNX3O60493 162 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 CYP3A4P08684 503 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 P4HA1P13674 534 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 ALDH5A1P51649 535 aaPredicted RBP7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 JAM2P57087 298 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 EIF3EP60228 445 aaKnown RBP7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 ELF3P78545 371 aaPredicted RBP7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 CYP24A1Q07973 514 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 RRP1BQ14684 758 aaKnown RBP7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 EMC2Q15006 297 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 STXBP2Q15833 593 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 CLEC16AQ2KHT3 1053 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 FAXCQ5TGI0 409 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 RSBN1LQ6PCB5 846 aaPredicted RBP7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 TRIM72Q6ZMU5 477 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 SH3BP5LQ7L8J4 393 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 RCOR2Q8IZ40 523 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 SEMA4DQ92854 862 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 ATP2A3Q93084 1043 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 GRAMD1AQ96CP6 724 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 KREMEN1Q96MU8 473 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 GBP5Q96PP8 586 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 OSBPL1AQ9BXW6 950 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 DCLK3Q9C098 648 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 SAE1Q9UBE0 346 aaPredicted RBP7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 SPDYE2BA6NHP3 402 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 ENO4A6NNW6 628 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 ATP9AO75110 1047 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 GH1P01241 217 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 SPDYE6P0CI01 402 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 ETS1P14921 441 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 MKRN3Q13064 507 aaKnown RBP7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 CUL2Q13617 745 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 PSMD6Q15008 389 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 DUOXA2Q1HG44 320 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 XKR3Q5GH77 459 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 RASIP1Q5U651 963 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 PCNX4Q63HM2 1172 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 KCTD17Q8N5Z5 321 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 FAM71DQ8N9W8 422 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 SMC1BQ8NDV3 1235 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 CERKQ8TCT0 537 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 TTC1Q99614 292 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 SMYD3Q9H7B4 428 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 RPF1Q9H9Y2 349 aaKnown RBP7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 WRAP73Q9P2S5 460 aaPredicted RBP7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 SLC12A6Q9UHW9 1150 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 TUBGCP6Q96RT7 1819 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 NCANO14594 1321 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 ZC3H4Q9UPT8 1303 aaKnown RBP7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 M0QYV0 167 aa7.24□□□□□ -1.25
SYNPO2-206ENST00000610556 WDR46O15213 610 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms