RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 UNKQ9C0B0 810 aaKnown RBP6.18□□□□□ -1.42
COL4A3BP-207ENST00000604926 NYXQ9GZU5 481 aa6.18□□□□□ -1.42
COL4A3BP-207ENST00000604926 PDE11AQ9HCR9 933 aa6.18□□□□□ -1.42
COL4A3BP-207ENST00000604926 NMRK1Q9NWW6 199 aa6.18□□□□□ -1.42
COL4A3BP-207ENST00000604926 SLC8A2Q9UPR5 921 aa6.18□□□□□ -1.42
COL4A3BP-207ENST00000604926 ASB3Q9Y575 518 aa6.18□□□□□ -1.42
COL4A3BP-207ENST00000604926 COL5A3P25940 1745 aaPredicted RBP6.18□□□□□ -1.42
COL4A3BP-207ENST00000604926 WDR46O15213 610 aaKnown RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 ECDO95905 644 aaPredicted RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 USP17L8P0C7I0 530 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 CNTFP26441 200 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 TAGLN2P37802 199 aaKnown RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 CPA2P48052 419 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 MLLT6P55198 1093 aaPredicted RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 ARL13BQ3SXY8 428 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 ZACNQ401N2 412 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 USP39Q53GS9 565 aaKnown RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 HEATR6Q6AI08 1181 aaKnown RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 C8orf74Q6P047 294 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 METTL2BQ6P1Q9 378 aaKnown RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 DRICH1Q6PGQ1 229 aaPredicted RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 MARK2Q7KZI7 788 aaKnown RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 RNF180Q86T96 592 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 ZNF554Q86TJ5 538 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 CCDC50Q8IVM0 306 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 ST13P5Q8NFI4 369 aaPredicted RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 TRPM4Q8TD43 1214 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 CALML6Q8TD86 181 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 DIS3LQ8TF46 1054 aaKnown RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 KRT35Q92764 455 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 BRF1Q92994 677 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 DENND2DQ9H6A0 471 aaPredicted RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 IFT22Q9H7X7 185 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 FANCEQ9HB96 536 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 PDLIM7Q9NR12 457 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 SRP68Q9UHB9 627 aaKnown RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 DACH1Q9UI36 760 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 CBY1Q9Y3M2 126 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 HCN4Q9Y3Q4 1203 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 NCF1BA6NI72 391 aaPredicted RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 GOLGA8CPA6NN73 597 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 NCF1CA8MVU1 366 aaPredicted RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 PDPK1O15530 556 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 IRAK2O43187 625 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 ALBP02768 609 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 POLBP06746 335 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 PF4V1P10720 104 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 PPP2R2AP63151 447 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 EFR3AQ14156 821 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 LRIT3Q3SXY7 679 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 FAM47CQ5HY64 1035 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 RTP2Q5QGT7 225 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 PRR23CQ6ZRP0 262 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 P3H2Q8IVL5 708 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 FAM186BQ8IYM0 893 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 ZNF527Q8NB42 609 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 PIK3C3Q8NEB9 887 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 OR56B2PQ8NGI1 322 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 SYN2Q92777 582 aaPredicted RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 MED30Q96HR3 178 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 KRT23Q9C075 422 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 INTS2Q9H0H0 1204 aaKnown RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 KLHL9Q9P2J3 617 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 CDC23Q9UJX2 597 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 STX8Q9UNK0 236 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 DNMT3AQ9Y6K1 912 aaPredicted RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 TYW5A2RUC4 315 aaKnown RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 VWA3AA6NCI4 1184 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 CAPN8A6NHC0 703 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 LRRIQ4A6NIV6 560 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 USP17L15C9J2P7 530 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 USP17L10C9JJH3 530 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 USP17L13C9JLJ4 530 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 USP17L12C9JPN9 530 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 USP17L11C9JVI0 530 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 USP17L21D6R901 530 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 USP17L18D6R9N7 530 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 USP17L22D6RA61 530 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 USP17L17D6RBQ6 530 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 USP17L19D6RCP7 530 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 USP17L20D6RJB6 530 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 SPECC1L-ADORA2AF8WAN1 911 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 ENDOD1O94919 500 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 OXSR1O95747 527 aaPredicted RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 CLTAP09496 248 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 SNRPA1P09661 255 aaKnown RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 TFPTP0C1Z6 253 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 ATP4AP20648 1035 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 TUBP50607 506 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 PMS1P54277 932 aaKnown RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 USP17L24Q0WX57 530 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 KCNAB2Q13303 367 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 IKBKEQ14164 716 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 NONOQ15233 471 aaKnown RBP eCLIP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 C5orf22Q49AR2 442 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 KIF6Q6ZMV9 814 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 USP31Q70CQ4 1352 aa6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 BZW1Q7L1Q6 419 aaKnown RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 DHX32Q7L7V1 743 aaKnown RBP6.17□□□□□ -1.42
COL4A3BP-207ENST00000604926 RAB11FIP2Q7L804 512 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms