RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 CBWD6Q4V339 395 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 CBWD3Q5JTY5 395 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 CBWD5Q5RIA9 395 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 HGSNATQ68CP4 663 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 NOTUMQ6P988 496 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 C15orf39Q6ZRI6 1047 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 TOGARAM2Q6ZUX3 1019 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 APBB1IPQ7Z5R6 666 aaPredicted RBP12.41□□□□□ -0.42
ZNF548-211ENST00000600927 CBWD2Q8IUF1 395 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 C17orf53Q8N3J3 647 aaPredicted RBP12.41□□□□□ -0.42
ZNF548-211ENST00000600927 KLHL23Q8NBE8 558 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 FBXL13Q8NEE6 735 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 KIF18AQ8NI77 898 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 SPPL3Q8TCT6 385 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 LPPQ93052 612 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 FAXDC2Q96IV6 333 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 CPB2Q96IY4 423 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 FNBP1Q96RU3 617 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 MSTO1Q9BUK6 570 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 MRPL9Q9BYD2 267 aaKnown RBP12.41□□□□□ -0.42
ZNF548-211ENST00000600927 TSGA10Q9BZW7 698 aa12.41□□□□□ -0.42
ZNF548-211ENST00000600927 USP27XA6NNY8 438 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 LRRIQ3A6PVS8 624 aaPredicted RBP12.4□□□□□ -0.42
ZNF548-211ENST00000600927 KRT86O43790 486 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 ADRB2P07550 413 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 IBSPP21815 317 aaPredicted RBP12.4□□□□□ -0.42
ZNF548-211ENST00000600927 PLCB3Q01970 1234 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 UBE3AQ05086 875 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 PRPF4BQ13523 1007 aaKnown RBP12.4□□□□□ -0.42
ZNF548-211ENST00000600927 TUBB2AQ13885 445 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 MPZL3Q6UWV2 235 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 CRELD2Q6UXH1 353 aaPredicted RBP12.4□□□□□ -0.42
ZNF548-211ENST00000600927 IRF2BP2Q7Z5L9 587 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 VPS36Q86VN1 386 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 BRSK2Q8IWQ3 736 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 ABI1Q8IZP0 508 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 MICALL1Q8N3F8 863 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 RNF169Q8NCN4 708 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 ATXN2LQ8WWM7 1075 aaKnown RBP12.4□□□□□ -0.42
ZNF548-211ENST00000600927 PPM1EQ8WY54 764 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 PGBD4Q96DM1 585 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 TUBB2BQ9BVA1 445 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 INTS2Q9H0H0 1204 aaKnown RBP12.4□□□□□ -0.42
ZNF548-211ENST00000600927 NSUN3Q9H649 340 aaKnown RBP12.4□□□□□ -0.42
ZNF548-211ENST00000600927 ALG13Q9NP73 1137 aaKnown RBP12.4□□□□□ -0.42
ZNF548-211ENST00000600927 NLRC4Q9NPP4 1024 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 AAASQ9NRG9 546 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 ARHGAP20Q9P2F6 1191 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 THEGQ9P2T0 379 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 LZTS1Q9Y250 596 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 IPPQ9Y573 584 aa12.4□□□□□ -0.42
ZNF548-211ENST00000600927 GOLGA8IPA6NC78 632 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 GOLGA8JA6NMD2 632 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 ABLIM1O14639 778 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 FSCN2O14926 492 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 B4GALT3O60512 393 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 FGF18O76093 207 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 TRIM49P0CI25 452 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 TRIM49CP0CI26 452 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 MCF2P10911 925 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 AFF1P51825 1210 aaKnown RBP12.39□□□□□ -0.43
ZNF548-211ENST00000600927 DLG4P78352 724 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 GCNT1Q02742 428 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 NCBP1Q09161 790 aaKnown RBP12.39□□□□□ -0.43
ZNF548-211ENST00000600927 KLHL30Q0D2K2 578 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 MTF1Q14872 753 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 ASIC2Q16515 512 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 ZACNQ401N2 412 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 NOMO2Q5JPE7 1267 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 ATF7IP2Q5U623 682 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 SLC27A1Q6PCB7 646 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 KCNT2Q6UVM3 1135 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 GLB1LQ6UWU2 654 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 SLC39A11Q8N1S5 342 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 PLEKHO2Q8TD55 490 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 UBE2Q2Q8WVN8 375 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 POF1BQ8WVV4 589 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 SAAL1Q96ER3 474 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 C16orf45Q96MC5 204 aaPredicted RBP12.39□□□□□ -0.43
ZNF548-211ENST00000600927 TSPAN18Q96SJ8 248 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 FAM213AQ9BRX8 229 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 RNF39Q9H2S5 420 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 DEF6Q9H4E7 631 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 PDZD7Q9H5P4 517 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 RSAD1Q9HA92 442 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 TBC1D13Q9NVG8 400 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 RAB20Q9NX57 234 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 DNAJC12Q9UKB3 198 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 CPSF3Q9UKF6 684 aaKnown RBP12.39□□□□□ -0.43
ZNF548-211ENST00000600927 COG5Q9UP83 839 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 PCDHB12Q9Y5F1 795 aa12.39□□□□□ -0.43
ZNF548-211ENST00000600927 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.38□□□□□ -0.43
ZNF548-211ENST00000600927 PJA2O43164 708 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 AKR1B10O60218 316 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 KIF5CO60282 957 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 FAM189A1O60320 539 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 IL18RAPO95256 599 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 C4BPAP04003 597 aaKnown RBP12.38□□□□□ -0.43
ZNF548-211ENST00000600927 IRS1P35568 1242 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 SOX5P35711 763 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms