RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, human

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FKRP-223	ENST00000600872	TPGS2	Q68CL5	300 aa		13.86	□□□□□ -0.19
FKRP-223	ENST00000600872	ADAL	Q6DHV7	355 aa		13.86	□□□□□ -0.19
FKRP-223	ENST00000600872	SLFN12L	Q6IEE8	588 aa		13.86	□□□□□ -0.19
FKRP-223	ENST00000600872	CNNM4	Q6P4Q7	775 aa		13.86	□□□□□ -0.19
FKRP-223	ENST00000600872	RNF19B	Q6ZMZ0	732 aa		13.86	□□□□□ -0.19
FKRP-223	ENST00000600872	SUGP1	Q8IWZ8	645 aa	Known RBP	13.86	□□□□□ -0.19
FKRP-223	ENST00000600872	CXorf38	Q8TB03	319 aa		13.86	□□□□□ -0.19
FKRP-223	ENST00000600872	NXPE3	Q969Y0	559 aa		13.86	□□□□□ -0.19
FKRP-223	ENST00000600872	TRIM9	Q9C026	710 aa		13.86	□□□□□ -0.19
FKRP-223	ENST00000600872	CRISPLD1	Q9H336	500 aa		13.86	□□□□□ -0.19
FKRP-223	ENST00000600872	C2CD2	Q9Y426	696 aa		13.86	□□□□□ -0.19
FKRP-223	ENST00000600872	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.86	□□□□□ -0.19
FKRP-223	ENST00000600872	NUMBL	Q9Y6R0	609 aa		13.86	□□□□□ -0.19
FKRP-223	ENST00000600872	COL4A3	Q01955	1670 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	XYLB	O75191	536 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	RHO	P08100	348 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	TYMP	P19971	482 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	CCR2	P41597	374 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	TMEM132D	Q14C87	1099 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	ZNF280D	Q6N043	979 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	PARM1	Q6UWI2	310 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	HSCB	Q8IWL3	235 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	NPAS3	Q8IXF0	933 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	APPL2	Q8NEU8	664 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	HPS3	Q969F9	1004 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	FAM212A	Q96EL1	285 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	SENP8	Q96LD8	212 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	ZNF396	Q96N95	335 aa	Predicted RBP	13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	ACCS	Q96QU6	501 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	TMEM209	Q96SK2	561 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	PHOX2B	Q99453	314 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	RTP3	Q9BQQ7	232 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	TNMD	Q9H2S6	317 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	PANK4	Q9NVE7	773 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	AFF4	Q9UHB7	1163 aa	Known RBP	13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	KCNH3	Q9ULD8	1083 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	ZDHHC9	Q9Y397	364 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	INSL5	Q9Y5Q6	135 aa		13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.85	□□□□□ -0.19
FKRP-223	ENST00000600872	XPOT	O43592	962 aa	Known RBP	13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	PI15	O43692	258 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	MOSPD3	O75425	235 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	PRPF6	O94906	941 aa	Known RBP	13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	GCNT3	O95395	438 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	CYP11A1	P05108	521 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	OR4Q2	P0C623	313 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	SRF	P11831	508 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	PDIA4	P13667	645 aa	Known RBP	13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	IDE	P14735	1019 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	ARPP19	P56211	112 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	YWHAH	Q04917	246 aa	Predicted RBP	13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	POSTN	Q15063	836 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	PABPC1L	Q4VXU2	614 aa	Known RBP	13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	POMGNT1	Q8WZA1	660 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	TCEAL4	Q96EI5	215 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	FAM84A	Q96KN4	292 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	CBWD1	Q9BRT8	395 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	LRRC3	Q9BY71	257 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	CUEDC2	Q9H467	287 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	CYP4F11	Q9HBI6	524 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	CEP72	Q9P209	647 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	WNT16	Q9UBV4	365 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	PCDHA7	Q9UN72	937 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	POLI	Q9UNA4	740 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	PCDHB13	Q9Y5F0	798 aa		13.84	□□□□□ -0.19
FKRP-223	ENST00000600872	GART	P22102	1010 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	CLCN5	P51795	746 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	EPHA5	P54756	1037 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	ADCY1	Q08828	1119 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	GPR17	Q13304	367 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	RESP18	Q5W5W9	173 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	ASTL	Q6HA08	431 aa	Predicted RBP	13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	BRSK2	Q8IWQ3	736 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	OR10T2	Q8NGX3	314 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	GPR152	Q8TDT2	470 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	SAAL1	Q96ER3	474 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	CHAMP1	Q96JM3	812 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	C7orf25	Q9BPX7	421 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	DNAJC25	Q9H1X3	360 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	SLC2A4RG	Q9NR83	387 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	RCOR1	Q9UKL0	485 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	MAFF	Q9ULX9	164 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	COL4A2	P08572	1712 aa		13.83	□□□□□ -0.2
FKRP-223	ENST00000600872	DENND4C	Q5VZ89	1909 aa		13.82	□□□□□ -0.2
FKRP-223	ENST00000600872	GALR2	O43603	387 aa	Predicted RBP	13.82	□□□□□ -0.2
FKRP-223	ENST00000600872	CFH	P08603	1231 aa		13.82	□□□□□ -0.2
FKRP-223	ENST00000600872	CEBPB	P17676	345 aa		13.82	□□□□□ -0.2
FKRP-223	ENST00000600872	PTPN2	P17706	415 aa		13.82	□□□□□ -0.2
FKRP-223	ENST00000600872	FCAR	P24071	287 aa		13.82	□□□□□ -0.2
FKRP-223	ENST00000600872	CASP1	P29466	404 aa		13.82	□□□□□ -0.2
FKRP-223	ENST00000600872	NUBP1	P53384	320 aa		13.82	□□□□□ -0.2
FKRP-223	ENST00000600872	DNM1	Q05193	864 aa	Known RBP	13.82	□□□□□ -0.2
FKRP-223	ENST00000600872	ALCAM	Q13740	583 aa		13.82	□□□□□ -0.2
FKRP-223	ENST00000600872	MYBPC2	Q14324	1141 aa		13.82	□□□□□ -0.2
FKRP-223	ENST00000600872	ATL3	Q6DD88	541 aa		13.82	□□□□□ -0.2
FKRP-223	ENST00000600872	OVOS1	Q6IE37	1185 aa		13.82	□□□□□ -0.2
FKRP-223	ENST00000600872	NT5DC4	Q86YG4	428 aa		13.82	□□□□□ -0.2

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