RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 C1orf220Q5T0J3 134 aa19.44■□□□□ 0.7
UPF1-210ENST00000600689 CC2D2BQ6DHV5 1058 aa19.44■□□□□ 0.7
UPF1-210ENST00000600689 AGGF1Q8N302 714 aaeCLIP19.44■□□□□ 0.7
UPF1-210ENST00000600689 ATL2Q8NHH9 583 aa19.44■□□□□ 0.7
UPF1-210ENST00000600689 GLT8D2Q9H1C3 349 aa19.44■□□□□ 0.7
UPF1-210ENST00000600689 CPSF2Q9P2I0 782 aaKnown RBP19.44■□□□□ 0.7
UPF1-210ENST00000600689 GTF3C4Q9UKN8 822 aa19.44■□□□□ 0.7
UPF1-210ENST00000600689 PEX3P56589 373 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 ZNF568Q3ZCX4 644 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 GMCL1P1Q8NEA9 526 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 C11orf70Q9BRQ4 267 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 NMRK1Q9NWW6 199 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 ASMTLO95671 621 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 RXRBP28702 533 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 KLC1Q07866 573 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 OTOAQ7RTW8 1153 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 XXYLT1Q8NBI6 393 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 RFWD2Q8NHY2 731 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 ZNF277Q9NRM2 450 aaPredicted RBP19.43■□□□□ 0.7
UPF1-210ENST00000600689 ZBED4O75132 1171 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 ADRA1DP25100 572 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 PRELPP51888 382 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 CDR2Q01850 454 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 PTK6Q13882 451 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 PHC3Q8NDX5 983 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 GMCL1Q96IK5 515 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 NACC1Q96RE7 527 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 FBXO6Q9NRD1 293 aaPredicted RBP19.43■□□□□ 0.7
UPF1-210ENST00000600689 PRR12Q9ULL5 1215 aa19.43■□□□□ 0.7
UPF1-210ENST00000600689 ATP8B3O60423 1300 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 IGLV3-22A0A075B6J6 115 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 KIF3CO14782 793 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 NVLO15381 856 aaKnown RBP19.42■□□□□ 0.7
UPF1-210ENST00000600689 CYP1A2P05177 515 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 KRT4P19013 534 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 ATP6V1C1P21283 382 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 PAPOLAP51003 745 aaKnown RBP19.42■□□□□ 0.7
UPF1-210ENST00000600689 TAS2R40P59535 323 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 KPNB1Q14974 876 aaKnown RBP19.42■□□□□ 0.7
UPF1-210ENST00000600689 RBBP5Q15291 538 aaKnown RBP19.42■□□□□ 0.7
UPF1-210ENST00000600689 TRABD2AQ86V40 505 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 FAM71AQ8IYT1 594 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 POMGNT1Q8WZA1 660 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 NEU2Q9Y3R4 380 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 ADGRA3Q8IWK6 1321 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 SNUPNO95149 360 aaKnown RBP19.42■□□□□ 0.7
UPF1-210ENST00000600689 UBTFL6P0CB48 400 aaPredicted RBP19.42■□□□□ 0.7
UPF1-210ENST00000600689 MFAP3P55082 362 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 HADHBP55084 474 aaKnown RBP19.42■□□□□ 0.7
UPF1-210ENST00000600689 SOX10P56693 466 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 GPS1Q13098 491 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 PLEKHG4Q58EX7 1191 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 MIPEPQ99797 713 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 ATRNL1Q5VV63 1379 aa19.42■□□□□ 0.7
UPF1-210ENST00000600689 A0A1B0GVG6 124 aa19.41■□□□□ 0.7
UPF1-210ENST00000600689 ENTPD3O75355 529 aa19.41■□□□□ 0.7
UPF1-210ENST00000600689 CFHP08603 1231 aa19.41■□□□□ 0.7
UPF1-210ENST00000600689 GAD2Q05329 585 aa19.41■□□□□ 0.7
UPF1-210ENST00000600689 ASAP3Q8TDY4 903 aa19.41■□□□□ 0.7
UPF1-210ENST00000600689 MAML1Q92585 1016 aa19.41■□□□□ 0.7
UPF1-210ENST00000600689 STAT4Q14765 748 aa19.41■□□□□ 0.7
UPF1-210ENST00000600689 MAPK6Q16659 721 aa19.41■□□□□ 0.7
UPF1-210ENST00000600689 GRK7Q8WTQ7 553 aa19.41■□□□□ 0.7
UPF1-210ENST00000600689 GRAMD1AQ96CP6 724 aa19.41■□□□□ 0.7
UPF1-210ENST00000600689 MAK16Q9BXY0 300 aaKnown RBP19.41■□□□□ 0.7
UPF1-210ENST00000600689 LRRC42Q9Y546 428 aa19.41■□□□□ 0.7
UPF1-210ENST00000600689 SPDYE2BA6NHP3 402 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 CAPN9O14815 690 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 EDF1O60869 148 aaKnown RBP19.4■□□□□ 0.7
UPF1-210ENST00000600689 NPM3O75607 178 aaKnown RBP19.4■□□□□ 0.7
UPF1-210ENST00000600689 PSMD10O75832 226 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 DCTN3O75935 186 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 FOSP01100 380 aaPredicted RBP19.4■□□□□ 0.7
UPF1-210ENST00000600689 ZCCHC18P0CG32 403 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 SPDYE6P0CI01 402 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 TCF4P15884 667 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 PECAM1P16284 738 aaPredicted RBP19.4■□□□□ 0.7
UPF1-210ENST00000600689 YARSP54577 528 aaKnown RBP19.4■□□□□ 0.7
UPF1-210ENST00000600689 PPP1R15BQ5SWA1 713 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 SNX30Q5VWJ9 437 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 MOXD1Q6UVY6 613 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 VPS52Q8N1B4 723 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 C12orf50Q8NA57 414 aaPredicted RBP19.4■□□□□ 0.7
UPF1-210ENST00000600689 MCUR1Q96AQ8 359 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 ARMCX1Q9P291 453 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 ARSEP51690 589 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 DYNLT1P63172 113 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 MOGSQ13724 837 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 TMEM39BQ9GZU3 492 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 ARL8BQ9NVJ2 186 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 DNPEPQ9ULA0 475 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 STARD13Q9Y3M8 1113 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 ATP9AO75110 1047 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 GZMAP12544 262 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 SP100P23497 879 aaPredicted RBP19.4■□□□□ 0.7
UPF1-210ENST00000600689 MARK3P27448 753 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 GCAP28676 217 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 RASSF2P50749 326 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 PDIA2Q13087 525 aaKnown RBP19.4■□□□□ 0.7
UPF1-210ENST00000600689 ACAD10Q6JQN1 1059 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms