RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 PIRO00625 290 aa16.95■□□□□ 0.3
IRF3-226ENST00000600453 ZNF197O14709 1029 aa16.95■□□□□ 0.3
IRF3-226ENST00000600453 ODC1P11926 461 aa16.95■□□□□ 0.3
IRF3-226ENST00000600453 CPB1P15086 417 aa16.95■□□□□ 0.3
IRF3-226ENST00000600453 ME1P48163 572 aa16.95■□□□□ 0.3
IRF3-226ENST00000600453 LILRA4P59901 499 aa16.95■□□□□ 0.3
IRF3-226ENST00000600453 E2F4Q16254 413 aa16.95■□□□□ 0.3
IRF3-226ENST00000600453 C9orf57Q5W0N0 161 aa16.95■□□□□ 0.3
IRF3-226ENST00000600453 IQCEQ6IPM2 695 aa16.95■□□□□ 0.3
IRF3-226ENST00000600453 ARMCX5Q6P1M9 558 aa16.95■□□□□ 0.3
IRF3-226ENST00000600453 CNNM4Q6P4Q7 775 aa16.95■□□□□ 0.3
IRF3-226ENST00000600453 ZNF512Q96ME7 567 aaPredicted RBP16.95■□□□□ 0.3
IRF3-226ENST00000600453 DPP3Q9NY33 737 aa16.95■□□□□ 0.3
IRF3-226ENST00000600453 DNMT3BQ9UBC3 853 aaKnown RBP16.95■□□□□ 0.3
IRF3-226ENST00000600453 DOCK6Q96HP0 2047 aa16.95■□□□□ 0.3
IRF3-226ENST00000600453 MYH15Q9Y2K3 1946 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 ANO9A1A5B4 782 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 ANHXE9PGG2 379 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 ADSSP30520 456 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 CLCN5P51795 746 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 MYBPC2Q14324 1141 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 OVOS1Q6IE37 1185 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 SHC4Q6S5L8 630 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 METTL23Q86XA0 190 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 LEMD2Q8NC56 503 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 SPRYD3Q8NCJ5 442 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 FGF13Q92913 245 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 DHX58Q96C10 678 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 SENP8Q96LD8 212 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 TRIM9Q9C026 710 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 RCOR1Q9UKL0 485 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 PCDHA7Q9UN72 937 aa16.94■□□□□ 0.3
IRF3-226ENST00000600453 MRPS23Q9Y3D9 190 aaKnown RBP16.94■□□□□ 0.3
IRF3-226ENST00000600453 TISP43B9A030 160 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 POLR2DO15514 142 aaKnown RBP16.93■□□□□ 0.3
IRF3-226ENST00000600453 MICAL2O94851 1124 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 NFICP08651 508 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 SRFP11831 508 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 PNPLA4P41247 253 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 TAF6P49848 677 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 PTPN5P54829 565 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 ADCY1Q08828 1119 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 KCNA1Q09470 495 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 GPR17Q13304 367 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 PLD1Q13393 1074 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 SURF1Q15526 300 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 FOXD4L6Q3SYB3 417 aaPredicted RBP16.93■□□□□ 0.3
IRF3-226ENST00000600453 CYP4A22Q5TCH4 519 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 ASTLQ6HA08 431 aaPredicted RBP16.93■□□□□ 0.3
IRF3-226ENST00000600453 CRELD2Q6UXH1 353 aaPredicted RBP16.93■□□□□ 0.3
IRF3-226ENST00000600453 FOXD4L3Q6VB84 417 aaPredicted RBP16.93■□□□□ 0.3
IRF3-226ENST00000600453 THEM5Q8N1Q8 247 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 C7orf25Q9BPX7 421 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 FAM213AQ9BRX8 229 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 GDE1Q9NZC3 331 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 TIMM13Q9Y5L4 95 aaPredicted RBP16.93■□□□□ 0.3
IRF3-226ENST00000600453 INSL5Q9Y5Q6 135 aa16.93■□□□□ 0.3
IRF3-226ENST00000600453 EIF3DO15371 548 aaKnown RBP eCLIP16.92■□□□□ 0.3
IRF3-226ENST00000600453 EXTL3O43909 919 aa16.92■□□□□ 0.3
IRF3-226ENST00000600453 PRPF6O94906 941 aaKnown RBP16.92■□□□□ 0.3
IRF3-226ENST00000600453 CYP11A1P05108 521 aa16.92■□□□□ 0.3
IRF3-226ENST00000600453 RHOP08100 348 aa16.92■□□□□ 0.3
IRF3-226ENST00000600453 SNRPFP62306 86 aaKnown RBP16.92■□□□□ 0.3
IRF3-226ENST00000600453 ASIC1P78348 528 aa16.92■□□□□ 0.3
IRF3-226ENST00000600453 NTHL1P78549 312 aa16.92■□□□□ 0.3
IRF3-226ENST00000600453 SMARCB1Q12824 385 aa16.92■□□□□ 0.3
IRF3-226ENST00000600453 HTR4Q13639 388 aa16.92■□□□□ 0.3
IRF3-226ENST00000600453 RSAD2Q8WXG1 361 aa16.92■□□□□ 0.3
IRF3-226ENST00000600453 RTP3Q9BQQ7 232 aa16.92■□□□□ 0.3
IRF3-226ENST00000600453 SMOC2Q9H3U7 446 aa16.92■□□□□ 0.3
IRF3-226ENST00000600453 KIAA1586Q9HCI6 787 aa16.92■□□□□ 0.3
IRF3-226ENST00000600453 HSFX1Q9UBD0 423 aa16.92■□□□□ 0.3
IRF3-226ENST00000600453 R3HCC1Q9Y3T6 440 aaKnown RBP16.92■□□□□ 0.3
IRF3-226ENST00000600453 ATP6V1DQ9Y5K8 247 aa16.92■□□□□ 0.3
IRF3-226ENST00000600453 PVALEFA0A1B0GWK0 134 aa16.91■□□□□ 0.3
IRF3-226ENST00000600453 SEC24AO95486 1093 aa16.91■□□□□ 0.3
IRF3-226ENST00000600453 GUCY2FP51841 1108 aa16.91■□□□□ 0.3
IRF3-226ENST00000600453 CASP5P51878 434 aa16.91■□□□□ 0.3
IRF3-226ENST00000600453 DNM1Q05193 864 aaKnown RBP16.91■□□□□ 0.3
IRF3-226ENST00000600453 SV2CQ496J9 727 aa16.91■□□□□ 0.3
IRF3-226ENST00000600453 RESP18Q5W5W9 173 aa16.91■□□□□ 0.3
IRF3-226ENST00000600453 RNF19BQ6ZMZ0 732 aa16.91■□□□□ 0.3
IRF3-226ENST00000600453 BRSK2Q8IWQ3 736 aa16.91■□□□□ 0.3
IRF3-226ENST00000600453 CEP57L1Q8IYX8 460 aa16.91■□□□□ 0.3
IRF3-226ENST00000600453 GPD1LQ8N335 351 aa16.91■□□□□ 0.3
IRF3-226ENST00000600453 ZNF560Q96MR9 790 aa16.91■□□□□ 0.3
IRF3-226ENST00000600453 SLC2A4RGQ9NR83 387 aa16.91■□□□□ 0.3
IRF3-226ENST00000600453 HCFC1R1Q9NWW0 138 aa16.91■□□□□ 0.3
IRF3-226ENST00000600453 RBAKQ9NYW8 714 aaPredicted RBP16.91■□□□□ 0.3
IRF3-226ENST00000600453 NUMBLQ9Y6R0 609 aa16.91■□□□□ 0.3
IRF3-226ENST00000600453 ZNF233A6NK53 670 aa16.9■□□□□ 0.3
IRF3-226ENST00000600453 KPNA7A9QM74 516 aa16.9■□□□□ 0.3
IRF3-226ENST00000600453 TULP1O00294 542 aaPredicted RBP16.9■□□□□ 0.3
IRF3-226ENST00000600453 CYB561D2O14569 222 aa16.9■□□□□ 0.3
IRF3-226ENST00000600453 PDGFBP01127 241 aaPredicted RBP16.9■□□□□ 0.3
IRF3-226ENST00000600453 RFX1P22670 979 aa16.9■□□□□ 0.3
IRF3-226ENST00000600453 ALDH1A3P47895 512 aa16.9■□□□□ 0.3
IRF3-226ENST00000600453 EPHB3P54753 998 aa16.9■□□□□ 0.3
IRF3-226ENST00000600453 TFAMQ00059 246 aaKnown RBP16.9■□□□□ 0.3
IRF3-226ENST00000600453 FAM26FQ5R3K3 315 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms