RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 ROBO3Q96MS0 1386 aa15.56■□□□□ 0.08
SYMPK-213ENST00000599460 ZC3H11AO75152 810 aaKnown RBP eCLIP15.56■□□□□ 0.084e-6■■■■■ 31.2
SYMPK-213ENST00000599460 GPD1P21695 349 aa15.56■□□□□ 0.08
SYMPK-213ENST00000599460 DEUP1Q05D60 604 aa15.56■□□□□ 0.08
SYMPK-213ENST00000599460 FEZF2Q8TBJ5 459 aa15.56■□□□□ 0.08
SYMPK-213ENST00000599460 UBIAD1Q9Y5Z9 338 aa15.56■□□□□ 0.08
SYMPK-213ENST00000599460 ALG6Q9Y672 507 aa15.56■□□□□ 0.08
SYMPK-213ENST00000599460 CASZ1Q86V15 1759 aa15.56■□□□□ 0.08
SYMPK-213ENST00000599460 GPC4O75487 556 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 B3GAT3O94766 335 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 FAM200BP0CF97 657 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 FGFR4P22455 802 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 YY1P25490 414 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 IRX4P78413 519 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 BFSP2Q13515 415 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 DCAF6Q58WW2 860 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 IQSEC1Q6DN90 963 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 CCDC60Q8IWA6 550 aaPredicted RBP15.55■□□□□ 0.08
SYMPK-213ENST00000599460 SLC7A14Q8TBB6 771 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 XPNPEP3Q9NQH7 507 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 LMCD1Q9NZU5 365 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 PPARGP37231 505 aaPredicted RBP15.55■□□□□ 0.08
SYMPK-213ENST00000599460 RAP1GAPP47736 663 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 ZNF449Q6P9G9 518 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 GOLPH3Q9H4A6 298 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 TRAF3IP3Q9Y228 551 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 KCNN4O15554 427 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 CDR2Q01850 454 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 SNX17Q15036 470 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 ZNF512Q96ME7 567 aaPredicted RBP15.55■□□□□ 0.08
SYMPK-213ENST00000599460 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.55■□□□□ 0.082e-6■□□□□ 9.3
SYMPK-213ENST00000599460 ARHGAP42A6NI28 874 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 TRPA1O75762 1119 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 RPLP2P05387 115 aaKnown RBP15.55■□□□□ 0.08
SYMPK-213ENST00000599460 NNMTP40261 264 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 ALDH7A1P49419 539 aaKnown RBP15.55■□□□□ 0.08
SYMPK-213ENST00000599460 ACCSLQ4AC99 568 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 CELF3Q5SZQ8 465 aaKnown RBP15.55■□□□□ 0.08
SYMPK-213ENST00000599460 AMIGO3Q86WK7 504 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 USP20Q9Y2K6 914 aa15.55■□□□□ 0.08
SYMPK-213ENST00000599460 A0A087X0T9 212 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 FAM228BP0C875 321 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 INHBEP58166 350 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 MYL6P60660 151 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 EFHC1Q5JVL4 640 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 ACOT1Q86TX2 421 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 CCDC197Q8NCU1 140 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 COPS5Q92905 334 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 VPS39Q96JC1 886 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 TINF2Q9BSI4 451 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 NAGPAQ9UK23 515 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 INTUQ9ULD6 942 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 PHF2O75151 1096 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 LGALS2P05162 132 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 CYP11B1P15538 503 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 CCT5P48643 541 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 FSCN1Q16658 493 aaKnown RBP15.54■□□□□ 0.08
SYMPK-213ENST00000599460 KLHL38Q2WGJ6 581 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 CHADLQ6NUI6 762 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 TACC3Q9Y6A5 838 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 PSMD6Q15008 389 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 FIGNQ5HY92 759 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 SV2AQ7L0J3 742 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 SPATS2Q86XZ4 545 aaKnown RBP15.54■□□□□ 0.08
SYMPK-213ENST00000599460 IL31RAQ8NI17 732 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 DDX50Q9BQ39 737 aaKnown RBP15.54■□□□□ 0.08
SYMPK-213ENST00000599460 COLEC11Q9BWP8 271 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 SNTG2Q9NY99 539 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 SMARCAL1Q9NZC9 954 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 CYB561D2O14569 222 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 PSEN2P49810 448 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 FUT2Q10981 343 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 IL17AQ16552 155 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 SMTNL2Q2TAL5 461 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 SH3TC2Q8TF17 1288 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 FIS1Q9Y3D6 152 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 GLTPD2A6NH11 291 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 EEF2KO00418 725 aaKnown RBP15.54■□□□□ 0.08
SYMPK-213ENST00000599460 PLA2G6O60733 806 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 GGCXP38435 758 aa15.54■□□□□ 0.08
SYMPK-213ENST00000599460 ABI2Q9NYB9 513 aaPredicted RBP15.54■□□□□ 0.08
SYMPK-213ENST00000599460 C2CD2LO14523 706 aa15.53■□□□□ 0.08
SYMPK-213ENST00000599460 KRT38O76015 456 aa15.53■□□□□ 0.08
SYMPK-213ENST00000599460 MCF2P10911 925 aa15.53■□□□□ 0.08
SYMPK-213ENST00000599460 MDM2Q00987 491 aaPredicted RBP15.53■□□□□ 0.08
SYMPK-213ENST00000599460 BEX3Q00994 111 aa15.53■□□□□ 0.08
SYMPK-213ENST00000599460 ZNF235Q14590 738 aa15.53■□□□□ 0.08
SYMPK-213ENST00000599460 KLC3Q6P597 504 aa15.53■□□□□ 0.08
SYMPK-213ENST00000599460 SH3BP5LQ7L8J4 393 aa15.53■□□□□ 0.08
SYMPK-213ENST00000599460 A0A087WUV0 522 aaPredicted RBP15.53■□□□□ 0.08
SYMPK-213ENST00000599460 TARSL2A2RTX5 802 aaKnown RBP15.53■□□□□ 0.08
SYMPK-213ENST00000599460 RASA4BC9J798 803 aa15.53■□□□□ 0.08
SYMPK-213ENST00000599460 RASA4O43374 803 aa15.53■□□□□ 0.08
SYMPK-213ENST00000599460 ONECUT3O60422 494 aaPredicted RBP15.53■□□□□ 0.08
SYMPK-213ENST00000599460 THP07101 528 aa15.53■□□□□ 0.08
SYMPK-213ENST00000599460 TAF1BQ53T94 588 aaPredicted RBP15.53■□□□□ 0.08
SYMPK-213ENST00000599460 BFARQ9NZS9 450 aa15.53■□□□□ 0.08
SYMPK-213ENST00000599460 GTF3C4Q9UKN8 822 aa15.53■□□□□ 0.08
SYMPK-213ENST00000599460 TTI1O43156 1089 aa15.53■□□□□ 0.08
SYMPK-213ENST00000599460 NCAM1P13591 858 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms