RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 DHX58Q96C10 678 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 SENP8Q96LD8 212 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 RPP25Q9BUL9 199 aaKnown RBP16.34■□□□□ 0.21
LIG1-215ENST00000597901 OXCT2Q9BYC2 517 aaPredicted RBP16.34■□□□□ 0.21
LIG1-215ENST00000597901 FGFBP2Q9BYJ0 223 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 TNMDQ9H2S6 317 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 CUEDC2Q9H467 287 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 DPP3Q9NY33 737 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 WNT16Q9UBV4 365 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 KCNH3Q9ULD8 1083 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 MAFFQ9ULX9 164 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 C2CD2Q9Y426 696 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 MYO10Q9HD67 2058 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 TYMPP19971 482 aa16.33■□□□□ 0.2
LIG1-215ENST00000597901 HTR4Q13639 388 aa16.33■□□□□ 0.2
LIG1-215ENST00000597901 ALCAMQ13740 583 aa16.33■□□□□ 0.2
LIG1-215ENST00000597901 PARM1Q6UWI2 310 aa16.33■□□□□ 0.2
LIG1-215ENST00000597901 RNF19BQ6ZMZ0 732 aa16.33■□□□□ 0.2
LIG1-215ENST00000597901 ZSWIM2Q8NEG5 633 aa16.33■□□□□ 0.2
LIG1-215ENST00000597901 KCNG4Q8TDN1 519 aa16.33■□□□□ 0.2
LIG1-215ENST00000597901 FAM213AQ9BRX8 229 aa16.33■□□□□ 0.2
LIG1-215ENST00000597901 MFSD1Q9H3U5 465 aa16.33■□□□□ 0.2
LIG1-215ENST00000597901 TMEM206Q9H813 350 aa16.33■□□□□ 0.2
LIG1-215ENST00000597901 RCOR1Q9UKL0 485 aa16.33■□□□□ 0.2
LIG1-215ENST00000597901 FBXL21Q9UKT6 434 aa16.33■□□□□ 0.2
LIG1-215ENST00000597901 CFAP45Q9UL16 551 aa16.33■□□□□ 0.2
LIG1-215ENST00000597901 PCDHA7Q9UN72 937 aa16.33■□□□□ 0.2
LIG1-215ENST00000597901 MRPS23Q9Y3D9 190 aaKnown RBP16.33■□□□□ 0.2
LIG1-215ENST00000597901 NUMBLQ9Y6R0 609 aa16.33■□□□□ 0.2
LIG1-215ENST00000597901 IL18RAPO95256 599 aa16.32■□□□□ 0.2
LIG1-215ENST00000597901 LDHAP00338 332 aaKnown RBP16.32■□□□□ 0.2
LIG1-215ENST00000597901 RHOP08100 348 aa16.32■□□□□ 0.2
LIG1-215ENST00000597901 CFHP08603 1231 aa16.32■□□□□ 0.2
LIG1-215ENST00000597901 SRFP11831 508 aa16.32■□□□□ 0.2
LIG1-215ENST00000597901 CPB1P15086 417 aa16.32■□□□□ 0.2
LIG1-215ENST00000597901 NPR3P17342 541 aa16.32■□□□□ 0.2
LIG1-215ENST00000597901 GARTP22102 1010 aa16.32■□□□□ 0.2
LIG1-215ENST00000597901 CLCN5P51795 746 aa16.32■□□□□ 0.2
LIG1-215ENST00000597901 NUBP1P53384 320 aa16.32■□□□□ 0.2
LIG1-215ENST00000597901 ASTLQ6HA08 431 aaPredicted RBP16.32■□□□□ 0.2
LIG1-215ENST00000597901 FGF14Q92915 247 aa16.32■□□□□ 0.2
LIG1-215ENST00000597901 HPS3Q969F9 1004 aa16.32■□□□□ 0.2
LIG1-215ENST00000597901 C7orf25Q9BPX7 421 aa16.32■□□□□ 0.2
LIG1-215ENST00000597901 TRIM9Q9C026 710 aa16.32■□□□□ 0.2
LIG1-215ENST00000597901 AVENQ9NQS1 362 aaPredicted RBP16.32■□□□□ 0.2
LIG1-215ENST00000597901 INSL5Q9Y5Q6 135 aa16.32■□□□□ 0.2
LIG1-215ENST00000597901 TRIP11Q15643 1979 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 GOLGA8IPA6NC78 632 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 OR6C75A6NL08 312 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 GOLGA8JA6NMD2 632 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 TULP1O00294 542 aaPredicted RBP16.31■□□□□ 0.2
LIG1-215ENST00000597901 POLR2DO15514 142 aaKnown RBP16.31■□□□□ 0.2
LIG1-215ENST00000597901 OR4Q2P0C623 313 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 ME1P48163 572 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 DNM1Q05193 864 aaKnown RBP16.31■□□□□ 0.2
LIG1-215ENST00000597901 TCF15Q12870 199 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 GPR17Q13304 367 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 OVOS1Q6IE37 1185 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 CNNM4Q6P4Q7 775 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 POTEHQ6S545 545 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 NT5DC4Q86YG4 428 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 EFCAB13Q8IY85 973 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 SIX5Q8N196 739 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 TMEM105Q8N8V8 129 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 GLIS3Q8NEA6 775 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 FLCNQ8NFG4 579 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 SAAL1Q96ER3 474 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 MCRS1Q96EZ8 462 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 BORCS6Q96GS4 357 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 ZNF512Q96ME7 567 aaPredicted RBP16.31■□□□□ 0.2
LIG1-215ENST00000597901 CORO1BQ9BR76 489 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 CBWD1Q9BRT8 395 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 PCIF1Q9H4Z3 704 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 CEP72Q9P209 647 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 TRIOO75962 3097 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 VWA8A3KMH1 1905 aa16.31■□□□□ 0.2
LIG1-215ENST00000597901 MYH11P35749 1972 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 MTCL1Q9Y4B5 1905 aaKnown RBP16.3■□□□□ 0.2
LIG1-215ENST00000597901 KRBA1A5PL33 1030 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 CYB561D2O14569 222 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 PI15O43692 258 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 EXTL3O43909 919 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 VNN2O95498 520 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 CYP11A1P05108 521 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 ODC1P11926 461 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 WNT7BP56706 349 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 GPC5P78333 572 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 TWF1Q12792 350 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 DUSP4Q13115 394 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 MYBPC2Q14324 1141 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 SLC5A9Q2M3M2 681 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 RESP18Q5W5W9 173 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 ARMCX5Q6P1M9 558 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 STXBP4Q6ZWJ1 553 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 NPAS3Q8IXF0 933 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 GPR152Q8TDT2 470 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 ING5Q8WYH8 240 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 PGLYRP2Q96PD5 576 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 FAM13BQ9NYF5 915 aa16.3■□□□□ 0.2
LIG1-215ENST00000597901 GDE1Q9NZC3 331 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms