RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 CPB1P15086 417 aa25.46■■□□□ 1.67
LSM4-204ENST00000594828 LILRA4P59901 499 aa25.46■■□□□ 1.67
LSM4-204ENST00000594828 POU5F1Q01860 360 aaKnown RBP25.46■■□□□ 1.67
LSM4-204ENST00000594828 ADCY1Q08828 1119 aa25.46■■□□□ 1.67
LSM4-204ENST00000594828 KCNA1Q09470 495 aa25.46■■□□□ 1.67
LSM4-204ENST00000594828 L1TD1Q5T7N2 865 aaKnown RBP25.46■■□□□ 1.67
LSM4-204ENST00000594828 FOXD4L5Q5VV16 416 aaPredicted RBP25.46■■□□□ 1.67
LSM4-204ENST00000594828 CWF19L1Q69YN2 538 aaKnown RBP25.46■■□□□ 1.67
LSM4-204ENST00000594828 MTSS1LQ765P7 747 aa25.46■■□□□ 1.67
LSM4-204ENST00000594828 FOXD4L4Q8WXT5 416 aaPredicted RBP25.46■■□□□ 1.67
LSM4-204ENST00000594828 RPP25Q9BUL9 199 aaKnown RBP25.46■■□□□ 1.67
LSM4-204ENST00000594828 OLFML3Q9NRN5 406 aa25.46■■□□□ 1.67
LSM4-204ENST00000594828 PANK4Q9NVE7 773 aa25.46■■□□□ 1.67
LSM4-204ENST00000594828 INSL5Q9Y5Q6 135 aa25.46■■□□□ 1.67
LSM4-204ENST00000594828 WDFY4Q6ZS81 3184 aa25.46■■□□□ 1.67
LSM4-204ENST00000594828 PPEF2O14830 753 aa25.45■■□□□ 1.66
LSM4-204ENST00000594828 PAX3P23760 479 aa25.45■■□□□ 1.66
LSM4-204ENST00000594828 ADSSP30520 456 aa25.45■■□□□ 1.66
LSM4-204ENST00000594828 MRE11P49959 708 aa25.45■■□□□ 1.66
LSM4-204ENST00000594828 C9orf57Q5W0N0 161 aa25.45■■□□□ 1.66
LSM4-204ENST00000594828 NPAS3Q8IXF0 933 aa25.45■■□□□ 1.66
LSM4-204ENST00000594828 AVENQ9NQS1 362 aaPredicted RBP25.45■■□□□ 1.66
LSM4-204ENST00000594828 CA14Q9ULX7 337 aa25.45■■□□□ 1.66
LSM4-204ENST00000594828 C2CD2Q9Y426 696 aa25.45■■□□□ 1.66
LSM4-204ENST00000594828 FRMD3A2A2Y4 597 aa25.44■■□□□ 1.66
LSM4-204ENST00000594828 STK25O00506 426 aa25.44■■□□□ 1.66
LSM4-204ENST00000594828 PIRO00625 290 aa25.44■■□□□ 1.66
LSM4-204ENST00000594828 YEATS4O95619 227 aa25.44■■□□□ 1.66
LSM4-204ENST00000594828 AOC1P19801 751 aa25.44■■□□□ 1.66
LSM4-204ENST00000594828 TYMPP19971 482 aa25.44■■□□□ 1.66
LSM4-204ENST00000594828 CRELD2Q6UXH1 353 aaPredicted RBP25.44■■□□□ 1.66
LSM4-204ENST00000594828 RNF19BQ6ZMZ0 732 aa25.44■■□□□ 1.66
LSM4-204ENST00000594828 GPR152Q8TDT2 470 aa25.44■■□□□ 1.66
LSM4-204ENST00000594828 ING5Q8WYH8 240 aa25.44■■□□□ 1.66
LSM4-204ENST00000594828 CORO1BQ9BR76 489 aa25.44■■□□□ 1.66
LSM4-204ENST00000594828 SLC2A4RGQ9NR83 387 aa25.44■■□□□ 1.66
LSM4-204ENST00000594828 ANO9A1A5B4 782 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 KRBA1A5PL33 1030 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 OR6C75A6NL08 312 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 PI15O43692 258 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 CASP5P51878 434 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 ALCAMQ13740 583 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 SLC5A9Q2M3M2 681 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 OVOS1Q6IE37 1185 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 CCDC65Q8IXS2 484 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 SYCP3Q8IZU3 236 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 ELMOD1Q8N336 334 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 MCRS1Q96EZ8 462 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 SENP8Q96LD8 212 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 ZNF512Q96ME7 567 aaPredicted RBP25.43■■□□□ 1.66
LSM4-204ENST00000594828 RTP3Q9BQQ7 232 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 LRRC27Q9C0I9 530 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 GDE1Q9NZC3 331 aa25.43■■□□□ 1.66
LSM4-204ENST00000594828 NOTCH4Q99466 2003 aa25.42■■□□□ 1.66
LSM4-204ENST00000594828 H0Y858 1186 aa25.42■■□□□ 1.66
LSM4-204ENST00000594828 SPTLC1O15269 473 aa25.42■■□□□ 1.66
LSM4-204ENST00000594828 CUTAO60888 179 aa25.42■■□□□ 1.66
LSM4-204ENST00000594828 ZSCAN22P10073 491 aaPredicted RBP25.42■■□□□ 1.66
LSM4-204ENST00000594828 ODC1P11926 461 aa25.42■■□□□ 1.66
LSM4-204ENST00000594828 IQCEQ6IPM2 695 aa25.42■■□□□ 1.66
LSM4-204ENST00000594828 ATOH1Q92858 354 aaPredicted RBP25.42■■□□□ 1.66
LSM4-204ENST00000594828 PHOX2BQ99453 314 aa25.42■■□□□ 1.66
LSM4-204ENST00000594828 TNMDQ9H2S6 317 aa25.42■■□□□ 1.66
LSM4-204ENST00000594828 DPP3Q9NY33 737 aa25.42■■□□□ 1.66
LSM4-204ENST00000594828 ZNF197O14709 1029 aa25.41■■□□□ 1.66
LSM4-204ENST00000594828 IL18RAPO95256 599 aa25.41■■□□□ 1.66
LSM4-204ENST00000594828 OR4Q2P0C623 313 aa25.41■■□□□ 1.66
LSM4-204ENST00000594828 RFX1P22670 979 aa25.41■■□□□ 1.66
LSM4-204ENST00000594828 GPC5P78333 572 aa25.41■■□□□ 1.66
LSM4-204ENST00000594828 TWF1Q12792 350 aa25.41■■□□□ 1.66
LSM4-204ENST00000594828 E2F4Q16254 413 aa25.41■■□□□ 1.66
LSM4-204ENST00000594828 FOXD4L6Q3SYB3 417 aaPredicted RBP25.41■■□□□ 1.66
LSM4-204ENST00000594828 CYP4A22Q5TCH4 519 aa25.41■■□□□ 1.66
LSM4-204ENST00000594828 FOXD4L3Q6VB84 417 aaPredicted RBP25.41■■□□□ 1.66
LSM4-204ENST00000594828 KXD1Q9BQD3 176 aa25.41■■□□□ 1.66
LSM4-204ENST00000594828 FAM213AQ9BRX8 229 aa25.41■■□□□ 1.66
LSM4-204ENST00000594828 CUEDC2Q9H467 287 aa25.41■■□□□ 1.66
LSM4-204ENST00000594828 TULP1O00294 542 aaPredicted RBP25.4■■□□□ 1.66
LSM4-204ENST00000594828 LDHAP00338 332 aaKnown RBP25.4■■□□□ 1.66
LSM4-204ENST00000594828 F13A1P00488 732 aa25.4■■□□□ 1.66
LSM4-204ENST00000594828 GARTP22102 1010 aa25.4■■□□□ 1.66
LSM4-204ENST00000594828 GPR17Q13304 367 aa25.4■■□□□ 1.66
LSM4-204ENST00000594828 MYBPC2Q14324 1141 aa25.4■■□□□ 1.66
LSM4-204ENST00000594828 PRSS36Q5K4E3 855 aa25.4■■□□□ 1.66
LSM4-204ENST00000594828 ARMCX5Q6P1M9 558 aa25.4■■□□□ 1.66
LSM4-204ENST00000594828 PDZD4Q76G19 769 aaPredicted RBP25.4■■□□□ 1.66
LSM4-204ENST00000594828 NT5DC4Q86YG4 428 aa25.4■■□□□ 1.66
LSM4-204ENST00000594828 PGLYRP2Q96PD5 576 aa25.4■■□□□ 1.66
LSM4-204ENST00000594828 FGFBP2Q9BYJ0 223 aa25.4■■□□□ 1.66
LSM4-204ENST00000594828 TMEM206Q9H813 350 aa25.4■■□□□ 1.66
LSM4-204ENST00000594828 ARHGEF3Q9NR81 526 aa25.4■■□□□ 1.66
LSM4-204ENST00000594828 KBTBD4Q9NVX7 518 aa25.4■■□□□ 1.66
LSM4-204ENST00000594828 CEP72Q9P209 647 aa25.4■■□□□ 1.66
LSM4-204ENST00000594828 MICAL2O94851 1124 aa25.39■■□□□ 1.66
LSM4-204ENST00000594828 PRPF6O94906 941 aaKnown RBP25.39■■□□□ 1.66
LSM4-204ENST00000594828 CEBPBP17676 345 aa25.39■■□□□ 1.66
LSM4-204ENST00000594828 AMPD3Q01432 767 aa25.39■■□□□ 1.66
LSM4-204ENST00000594828 SHC4Q6S5L8 630 aa25.39■■□□□ 1.66
LSM4-204ENST00000594828 EFCAB13Q8IY85 973 aa25.39■■□□□ 1.66
LSM4-204ENST00000594828 IQUBQ8NA54 791 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms