RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	ROR1	Q01973	937 aa		18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	PSMD2	Q13200	908 aa		18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	LMBRD2	Q68DH5	695 aa	Predicted RBP	18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	CES5A	Q6NT32	575 aa		18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	C15orf39	Q6ZRI6	1047 aa		18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	NT5DC4	Q86YG4	428 aa		18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	OR5B17	Q8NGF7	314 aa		18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	PLEKHO2	Q8TD55	490 aa		18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	RPGRIP1	Q96KN7	1286 aa		18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	SENP8	Q96LD8	212 aa		18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	DMAC2	Q9NW81	257 aa		18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	OAZ2	O95190	189 aa		18.72	■□□□□ 0.59
MBD1-221	ENST00000589867	SSTR3	P32745	418 aa	Predicted RBP	18.72	■□□□□ 0.59
MBD1-221	ENST00000589867	MTHFR	P42898	656 aa		18.72	■□□□□ 0.59
MBD1-221	ENST00000589867	SNRPF	P62306	86 aa	Known RBP	18.72	■□□□□ 0.59
MBD1-221	ENST00000589867	PNOC	Q13519	176 aa		18.72	■□□□□ 0.59
MBD1-221	ENST00000589867	KCNB1	Q14721	858 aa		18.72	■□□□□ 0.59
MBD1-221	ENST00000589867	ATAT1	Q5SQI0	421 aa		18.72	■□□□□ 0.59
MBD1-221	ENST00000589867	NECTIN4	Q96NY8	510 aa		18.72	■□□□□ 0.59
MBD1-221	ENST00000589867	TECTA	O75443	2155 aa		18.72	■□□□□ 0.59
MBD1-221	ENST00000589867	ZNF233	A6NK53	670 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	C2CD4D	B7Z1M9	353 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	PI4K2B	G5E9Z4	385 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	N4BP1	O75113	896 aa	Known RBP	18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	SEC24A	O95486	1093 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	TYMP	P19971	482 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	SP100	P23497	879 aa	Predicted RBP	18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	CYP2J2	P51589	502 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	TFAM	Q00059	246 aa	Known RBP	18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	FAM160A1	Q05DH4	1040 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	RNF135	Q8IUD6	432 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	RDH13	Q8NBN7	331 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	APPL2	Q8NEU8	664 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	SPATA20	Q8TB22	786 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	NOC3L	Q8WTT2	800 aa	Known RBP	18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	TMEM174	Q8WUU8	243 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	RIPOR3	Q96MK2	946 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	POP1	Q99575	1024 aa	Known RBP	18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	RTP3	Q9BQQ7	232 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	PRKD2	Q9BZL6	878 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	MTMR12	Q9C0I1	747 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	C11orf16	Q9NQ32	467 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	INTS13	Q9NVM9	706 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	ZDHHC7	Q9NXF8	308 aa		18.71	■□□□□ 0.59
MBD1-221	ENST00000589867	ITGB3	P05106	788 aa		18.7	■□□□□ 0.58
MBD1-221	ENST00000589867	CYP11A1	P05108	521 aa		18.7	■□□□□ 0.58
MBD1-221	ENST00000589867	C8A	P07357	584 aa		18.7	■□□□□ 0.58
MBD1-221	ENST00000589867	POLR2B	P30876	1174 aa	Known RBP	18.7	■□□□□ 0.58
MBD1-221	ENST00000589867	CYP24A1	Q07973	514 aa		18.7	■□□□□ 0.58
MBD1-221	ENST00000589867	SNRNP35	Q16560	246 aa	Known RBP	18.7	■□□□□ 0.58
MBD1-221	ENST00000589867	CTXN3	Q4LDR2	81 aa		18.7	■□□□□ 0.58
MBD1-221	ENST00000589867	XXYLT1	Q8NBI6	393 aa		18.7	■□□□□ 0.58
MBD1-221	ENST00000589867	ZNF461	Q8TAF7	563 aa		18.7	■□□□□ 0.58
MBD1-221	ENST00000589867	ZNF516	Q92618	1163 aa		18.7	■□□□□ 0.58
MBD1-221	ENST00000589867	ERCC4	Q92889	916 aa	Predicted RBP	18.7	■□□□□ 0.58
MBD1-221	ENST00000589867	MFSD14A	Q96MC6	490 aa		18.7	■□□□□ 0.58
MBD1-221	ENST00000589867	TMEM209	Q96SK2	561 aa		18.7	■□□□□ 0.58
MBD1-221	ENST00000589867	WDR6	Q9NNW5	1121 aa	Known RBP	18.7	■□□□□ 0.58
MBD1-221	ENST00000589867	CHMP5	Q9NZZ3	219 aa		18.7	■□□□□ 0.58
MBD1-221	ENST00000589867	CGN	Q9P2M7	1197 aa	Known RBP	18.7	■□□□□ 0.58
MBD1-221	ENST00000589867		H7C4K7	107 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	OR4Q2	P0C623	313 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	CASP4	P49662	377 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	TAF6	P49848	677 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	YWHAH	Q04917	246 aa	Predicted RBP	18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	PSMD6	Q15008	389 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	ZNF280D	Q6N043	979 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	CYP26C1	Q6V0L0	522 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	DSTYK	Q6XUX3	929 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	HS2ST1	Q7LGA3	356 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	SLC9A9	Q8IVB4	645 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	OR10T2	Q8NGX3	314 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	SLC7A14	Q8TBB6	771 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	SMG7	Q92540	1137 aa	Known RBP	18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	CRISPLD1	Q9H336	500 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	KIAA1586	Q9HCI6	787 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	MUTYH	Q9UIF7	546 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	AGAP1	Q9UPQ3	857 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	MAPK8IP1	Q9UQF2	711 aa		18.69	■□□□□ 0.58
MBD1-221	ENST00000589867	PDXK	O00764	312 aa		18.68	■□□□□ 0.58
MBD1-221	ENST00000589867	HOXA9	P31269	272 aa		18.68	■□□□□ 0.58
MBD1-221	ENST00000589867	ARPP19	P56211	112 aa		18.68	■□□□□ 0.58
MBD1-221	ENST00000589867	ZCWPW2	Q504Y3	356 aa		18.68	■□□□□ 0.58
MBD1-221	ENST00000589867	WSCD1	Q658N2	575 aa		18.68	■□□□□ 0.58
MBD1-221	ENST00000589867	RNF19B	Q6ZMZ0	732 aa		18.68	■□□□□ 0.58
MBD1-221	ENST00000589867	SMYD4	Q8IYR2	804 aa	Predicted RBP	18.68	■□□□□ 0.58
MBD1-221	ENST00000589867	TIGD1	Q96MW7	591 aa		18.68	■□□□□ 0.58
MBD1-221	ENST00000589867	DPP7	Q9UHL4	492 aa		18.68	■□□□□ 0.58
MBD1-221	ENST00000589867	TRAF3IP3	Q9Y228	551 aa		18.68	■□□□□ 0.58
MBD1-221	ENST00000589867	ARHGEF37	A1IGU5	675 aa		18.67	■□□□□ 0.58
MBD1-221	ENST00000589867	KPNA7	A9QM74	516 aa		18.67	■□□□□ 0.58
MBD1-221	ENST00000589867	NRG2	O14511	850 aa	Predicted RBP	18.67	■□□□□ 0.58
MBD1-221	ENST00000589867	CYB561D2	O14569	222 aa		18.67	■□□□□ 0.58
MBD1-221	ENST00000589867	CCL16	O15467	120 aa		18.67	■□□□□ 0.58
MBD1-221	ENST00000589867	POU2F2	P09086	479 aa		18.67	■□□□□ 0.58
MBD1-221	ENST00000589867	HNRNPA1	P09651	372 aa	Known RBP eCLIP	18.67	■□□□□ 0.58
MBD1-221	ENST00000589867	ATF2	P15336	505 aa		18.67	■□□□□ 0.58
MBD1-221	ENST00000589867	PAX3	P23760	479 aa		18.67	■□□□□ 0.58
MBD1-221	ENST00000589867	NTHL1	P78549	312 aa		18.67	■□□□□ 0.58
MBD1-221	ENST00000589867	UVSSA	Q2YD98	709 aa		18.67	■□□□□ 0.58

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