RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 ASB7Q9H672 318 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 TBC1D7Q9P0N9 293 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 IGSF9Q9P2J2 1179 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 TFIP11Q9UBB9 837 aaKnown RBP11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 PCDHB8Q9UN66 801 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 ATP6V1DQ9Y5K8 247 aa11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 ZFP37Q9Y6Q3 630 aaPredicted RBP11.5□□□□□ -0.57
CLPTM1-211ENST00000589347 A0A087X0B3 334 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 LACTBL1A8MY62 500 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 PRRG1O14668 218 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 KIAA0391O15091 583 aaKnown RBP11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 FAM189A1O60320 539 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 PPP1R37O75864 691 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 IL18RAPO95256 599 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 LRG1P02750 347 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 ODC1P11926 461 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 CPB1P15086 417 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 ROR1Q01973 937 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 YWHAHQ04917 246 aaPredicted RBP11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 SPAG1Q07617 926 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 BECN1Q14457 450 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 AXDND1Q5T1B0 1012 aaPredicted RBP11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 JADE1Q6IE81 842 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 SLC8B1Q6J4K2 584 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 SLC39A4Q6P5W5 647 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 DSTYKQ6XUX3 929 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 NT5DC4Q86YG4 428 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 CEP57L1Q8IYX8 460 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 ELMOD1Q8N336 334 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 NXPE3Q969Y0 559 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 ZNF707Q96C28 371 aaPredicted RBP11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 ZNF560Q96MR9 790 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 PANK2Q9BZ23 570 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 CPSF3Q9UKF6 684 aaKnown RBP11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 POLIQ9UNA4 740 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 C2CD2Q9Y426 696 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 UBE4BO95155 1302 aa11.49□□□□□ -0.57
CLPTM1-211ENST00000589347 MYH10P35580 1976 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 CCL16O15467 120 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 ADRB2P07550 413 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 GARTP22102 1010 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 FSHRP23945 695 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 ACOT2P49753 483 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 CLCN5P51795 746 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 ARPP19P56211 112 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 KRT85P78386 507 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 PLD1Q13393 1074 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 E2F4Q16254 413 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 ZBTB41Q5SVQ8 909 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 SPATA1Q5VX52 437 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 TPGS2Q68CL5 300 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 CWF19L1Q69YN2 538 aaKnown RBP11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 ARMCX5Q6P1M9 558 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 CD300LGQ6UXG3 332 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 ZNF461Q8TAF7 563 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 CNTNAP3BQ96NU0 1288 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 CNTNAP3Q9BZ76 1288 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 TRIM9Q9C026 710 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 KBTBD4Q9NVX7 518 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 EPS15L1Q9UBC2 864 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 LIMD1Q9UGP4 676 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 FBXL5Q9UKA1 691 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 MAFFQ9ULX9 164 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 STYXL1Q9Y6J8 313 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 OBSL1O75147 1896 aa11.48□□□□□ -0.57
CLPTM1-211ENST00000589347 ATRXP46100 2492 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 OR6C75A6NL08 312 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 ANKRD63C9JTQ0 380 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 M0QZQ0 153 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 EIF3DO15371 548 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 MEFVO15553 781 aaPredicted RBP11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 ADAM12O43184 909 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 ASGR2P07307 311 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 NFICP08651 508 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 TAF6P49848 677 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 DNM1Q05193 864 aaKnown RBP11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 TDGQ13569 410 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 PUM1Q14671 1186 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 ZBTB6Q15916 424 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 SHC4Q6S5L8 630 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 MTSS1LQ765P7 747 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 BRSK2Q8IWQ3 736 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 NOC3LQ8WTT2 800 aaKnown RBP11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 CACTINQ8WUQ7 758 aaKnown RBP11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 STRA6Q9BX79 667 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 MFSD1Q9H3U5 465 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 DLL3Q9NYJ7 618 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 RBAKQ9NYW8 714 aaPredicted RBP11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 AFF4Q9UHB7 1163 aaKnown RBP11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 DSEQ9UL01 958 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 DUSP12Q9UNI6 340 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 R3HCC1Q9Y3T6 440 aaKnown RBP11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 PTPRDP23468 1912 aa11.47□□□□□ -0.57
CLPTM1-211ENST00000589347 GPR179Q6PRD1 2367 aa11.46□□□□□ -0.57
CLPTM1-211ENST00000589347 WDR27A2RRH5 827 aa11.46□□□□□ -0.57
CLPTM1-211ENST00000589347 TISP43B9A030 160 aa11.46□□□□□ -0.57
CLPTM1-211ENST00000589347 TULP1O00294 542 aaPredicted RBP11.46□□□□□ -0.57
CLPTM1-211ENST00000589347 POLR2DO15514 142 aaKnown RBP11.46□□□□□ -0.57
CLPTM1-211ENST00000589347 EXTL3O43909 919 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 402.9 ms