RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 PJA1Q8NG27 643 aa15.58■□□□□ 0.08
VMP1-206ENST00000587945 DLGAP2Q9P1A6 1054 aa15.58■□□□□ 0.08
VMP1-206ENST00000587945 SRPRBQ9Y5M8 271 aaKnown RBP15.58■□□□□ 0.08
VMP1-206ENST00000587945 MTCL1Q9Y4B5 1905 aaKnown RBP15.58■□□□□ 0.08
VMP1-206ENST00000587945 SPTLC1O15269 473 aa15.57■□□□□ 0.08
VMP1-206ENST00000587945 XPOTO43592 962 aaKnown RBP15.57■□□□□ 0.08
VMP1-206ENST00000587945 OAZ2O95190 189 aa15.57■□□□□ 0.08
VMP1-206ENST00000587945 GJA1P17302 382 aa15.57■□□□□ 0.08
VMP1-206ENST00000587945 CD72P21854 359 aa15.57■□□□□ 0.08
VMP1-206ENST00000587945 SCP2P22307 547 aa15.57■□□□□ 0.08
VMP1-206ENST00000587945 MLF2Q15773 248 aaPredicted RBP15.57■□□□□ 0.08
VMP1-206ENST00000587945 FAM78AQ5JUQ0 283 aa15.57■□□□□ 0.08
VMP1-206ENST00000587945 ADALQ6DHV7 355 aa15.57■□□□□ 0.08
VMP1-206ENST00000587945 PDZD4Q76G19 769 aaPredicted RBP15.57■□□□□ 0.08
VMP1-206ENST00000587945 USP37Q86T82 979 aa15.57■□□□□ 0.08
VMP1-206ENST00000587945 ELMOD1Q8N336 334 aa15.57■□□□□ 0.08
VMP1-206ENST00000587945 BEST2Q8NFU1 509 aa15.57■□□□□ 0.08
VMP1-206ENST00000587945 SHDQ96IW2 340 aa15.57■□□□□ 0.08
VMP1-206ENST00000587945 ZNF512Q96ME7 567 aaPredicted RBP15.57■□□□□ 0.08
VMP1-206ENST00000587945 ZSWIM3Q96MP5 696 aa15.57■□□□□ 0.08
VMP1-206ENST00000587945 CRISPLD1Q9H336 500 aa15.57■□□□□ 0.08
VMP1-206ENST00000587945 MTF2Q9Y483 593 aaPredicted RBP15.57■□□□□ 0.08
VMP1-206ENST00000587945 KANSL1LA0AUZ9 987 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 MYMKA6NI61 221 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 ZNF197O14709 1029 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 MOSPD3O75425 235 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 ECI2O75521 394 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 MYL4P12829 197 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 FCARP24071 287 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 CDR1P51861 262 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 LILRA4P59901 499 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 DUSP4Q13115 394 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 TMEM132DQ14C87 1099 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 CYP4A22Q5TCH4 519 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 RRAGBQ5VZM2 374 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 C9orf57Q5W0N0 161 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 IQCEQ6IPM2 695 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 ZNF720Q7Z2F6 126 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 NKD2Q969F2 451 aaPredicted RBP15.56■□□□□ 0.08
VMP1-206ENST00000587945 SENP8Q96LD8 212 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 TMEM209Q96SK2 561 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 PANK2Q9BZ23 570 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 TBC1D7Q9P0N9 293 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 CCDC39Q9UFE4 941 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 MTMR6Q9Y217 621 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 YIPF1Q9Y548 306 aa15.56■□□□□ 0.08
VMP1-206ENST00000587945 TRIP11Q15643 1979 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 COL4A3Q01955 1670 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 PFKPQ01813 784 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 KCNA1Q09470 495 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 GRM2Q14416 872 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 UBXN2BQ14CS0 331 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 OVOS1Q6IE37 1185 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 CD302Q8IX05 232 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 ATAD1Q8NBU5 361 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 ELSPBP1Q96BH3 223 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 DNAJC19Q96DA6 116 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 USP28Q96RU2 1077 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 DDX23Q9BUQ8 820 aaKnown RBP15.55■□□□□ 0.08
VMP1-206ENST00000587945 ST6GALNAC4Q9H4F1 302 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 ASAH2Q9NR71 780 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 STK17AQ9UEE5 414 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 AGO2Q9UKV8 859 aaKnown RBP15.55■□□□□ 0.08
VMP1-206ENST00000587945 MAFFQ9ULX9 164 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 SLC27A5Q9Y2P5 690 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.55■□□□□ 0.08
VMP1-206ENST00000587945 STYXL1Q9Y6J8 313 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 R4GN57 208 aa15.55■□□□□ 0.08
VMP1-206ENST00000587945 A0A087X0B3 334 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 ANO9A1A5B4 782 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 OR6C75A6NL08 312 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 FAM170BA6NMN3 283 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 TULP1O00294 542 aaPredicted RBP15.54■□□□□ 0.08
VMP1-206ENST00000587945 PIRO00625 290 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 PPP1R37O75864 691 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 SOAT2O75908 522 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 TYMPP19971 482 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 ADSSP30520 456 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 ABCD1P33897 745 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 PRKCQQ04759 706 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 GPR17Q13304 367 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 TEAD2Q15562 447 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 SLFN12LQ6IEE8 588 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 CRELD2Q6UXH1 353 aaPredicted RBP15.54■□□□□ 0.08
VMP1-206ENST00000587945 TPRG1Q6ZUI0 275 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 SV2BQ7L1I2 683 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 C1orf210Q8IVY1 113 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 TTC9BQ8N6N2 239 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 ZSWIM2Q8NEG5 633 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 POMGNT1Q8WZA1 660 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 ASB16Q96NS5 453 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 TSPAN18Q96SJ8 248 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 STRA6Q9BX79 667 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 OXCT2Q9BYC2 517 aaPredicted RBP15.54■□□□□ 0.08
VMP1-206ENST00000587945 DNAJC25Q9H1X3 360 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 MRPL44Q9H9J2 332 aaKnown RBP15.54■□□□□ 0.08
VMP1-206ENST00000587945 ZFP14Q9HCL3 533 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 LTB4R2Q9NPC1 389 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 HEBP1Q9NRV9 189 aa15.54■□□□□ 0.08
VMP1-206ENST00000587945 NOTCH4Q99466 2003 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms