RNA–Protein interactions for RNA: ENST00000586988.5

DNMT1-211, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-211ENST00000586988 APOBEC3GQ9HC16 384 aaKnown RBP12.66□□□□□ -0.38
DNMT1-211ENST00000586988 CXXC1Q9P0U4 656 aaPredicted RBP12.66□□□□□ -0.38
DNMT1-211ENST00000586988 PCDH10Q9P2E7 1040 aa12.66□□□□□ -0.38
DNMT1-211ENST00000586988 CAPN11Q9UMQ6 739 aa12.66□□□□□ -0.38
DNMT1-211ENST00000586988 LUC7L2Q9Y383 392 aaKnown RBP12.66□□□□□ -0.38
DNMT1-211ENST00000586988 INSL6Q9Y581 213 aa12.66□□□□□ -0.38
DNMT1-211ENST00000586988 NUB1Q9Y5A7 615 aa12.66□□□□□ -0.38
DNMT1-211ENST00000586988 FHOD1Q9Y613 1164 aa12.66□□□□□ -0.38
DNMT1-211ENST00000586988 KPNA7A9QM74 516 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 AKR1B15C9JRZ8 316 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-211ENST00000586988 PPEF2O14830 753 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 EPHB6O15197 1021 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 TRAPPC3O43617 180 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 MFAP3LO75121 409 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 B3GAT3O94766 335 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 NOL4O94818 638 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 DDHD2O94830 711 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 SLC34A2O95436 690 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 RGS19P49795 217 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 HTRA4P83105 476 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-211ENST00000586988 ZBED6P86452 979 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 TBX2Q13207 712 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-211ENST00000586988 TSR1Q2NL82 804 aaKnown RBP12.65□□□□□ -0.38
DNMT1-211ENST00000586988 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.38
DNMT1-211ENST00000586988 IQCEQ6IPM2 695 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 SPOPLQ6IQ16 392 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 PHLDB3Q6NSJ2 640 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 DPY19L2P1Q6NXN4 242 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 DCLRE1AQ6PJP8 1040 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 ZNF280BQ86YH2 543 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 ARHGEF19Q8IW93 802 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 COLEC11Q9BWP8 271 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 NAA15Q9BXJ9 866 aaKnown RBP12.65□□□□□ -0.38
DNMT1-211ENST00000586988 STK33Q9BYT3 514 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 UBE2OQ9C0C9 1292 aaKnown RBP12.65□□□□□ -0.38
DNMT1-211ENST00000586988 DNAI2Q9GZS0 605 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 NRDE2Q9H7Z3 1164 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 CYP3A43Q9HB55 503 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 UBE2TQ9NPD8 197 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-211ENST00000586988 NLRC4Q9NPP4 1024 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.65□□□□□ -0.381e-7■■■■■ 62
DNMT1-211ENST00000586988 AAASQ9NRG9 546 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 GDAP2Q9NXN4 497 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 NXF1Q9UBU9 619 aaKnown RBP12.65□□□□□ -0.38
DNMT1-211ENST00000586988 DNAJC12Q9UKB3 198 aa12.65□□□□□ -0.38
DNMT1-211ENST00000586988 F8VZ95 297 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 TLL1O43897 1013 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 HUS1O60921 280 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 KIF4AO95239 1232 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 ALDH2P05091 517 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 PTMAP06454 111 aaKnown RBP12.64□□□□□ -0.39
DNMT1-211ENST00000586988 CCDC172P0C7W6 258 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 ODC1P11926 461 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 CASP14P31944 242 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 PPM1AP35813 382 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 STAT1P42224 750 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 ASPAP45381 313 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 ALDH7A1P49419 539 aaKnown RBP12.64□□□□□ -0.39
DNMT1-211ENST00000586988 AARSP49588 968 aaKnown RBP eCLIP12.64□□□□□ -0.39
DNMT1-211ENST00000586988 LILRA4P59901 499 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 ELAVL2Q12926 359 aaKnown RBP12.64□□□□□ -0.39
DNMT1-211ENST00000586988 DSTYKQ6XUX3 929 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 SCARA5Q6ZMJ2 495 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 RRAGAQ7L523 313 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 DPH6Q7L8W6 267 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 FIBCD1Q8N539 461 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 TOP6BLQ8N6T0 577 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 APPL2Q8NEU8 664 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 SPATA18Q8TC71 538 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 ZNF558Q96NG5 402 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 MMS19Q96T76 1030 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 RAD9AQ99638 391 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 BCO2Q9BYV7 579 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 ABHD10Q9NUJ1 306 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 DNAJB4Q9UDY4 337 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 ADAM28Q9UKQ2 775 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 DSEQ9UL01 958 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 FAN1Q9Y2M0 1017 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 PRG3Q9Y2Y8 225 aaPredicted RBP12.64□□□□□ -0.39
DNMT1-211ENST00000586988 RWDD3Q9Y3V2 267 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 SNX9Q9Y5X1 595 aa12.64□□□□□ -0.39
DNMT1-211ENST00000586988 MKI67P46013 3256 aaKnown RBP12.64□□□□□ -0.39
DNMT1-211ENST00000586988 SF3B1O75533 1304 aaKnown RBP eCLIP12.63□□□□□ -0.396e-7■■■■■ 164.4
DNMT1-211ENST00000586988 SCN1AP35498 2009 aa12.63□□□□□ -0.39
DNMT1-211ENST00000586988 LRRC53A6NM62 1247 aa12.63□□□□□ -0.39
DNMT1-211ENST00000586988 H0YGN5 161 aa12.63□□□□□ -0.39
DNMT1-211ENST00000586988 NRP1O14786 923 aa12.63□□□□□ -0.39
DNMT1-211ENST00000586988 NRDCO43847 1150 aa12.63□□□□□ -0.39
DNMT1-211ENST00000586988 B4GALT3O60512 393 aa12.63□□□□□ -0.39
DNMT1-211ENST00000586988 LRRN2O75325 713 aa12.63□□□□□ -0.39
DNMT1-211ENST00000586988 TADA2AO75478 443 aa12.63□□□□□ -0.39
DNMT1-211ENST00000586988 GALTP07902 379 aa12.63□□□□□ -0.39
DNMT1-211ENST00000586988 FAM163BP0C2L3 166 aa12.63□□□□□ -0.39
DNMT1-211ENST00000586988 KRT9P35527 623 aa12.63□□□□□ -0.39
DNMT1-211ENST00000586988 SLC11A1P49279 550 aa12.63□□□□□ -0.39
DNMT1-211ENST00000586988 FXR1P51114 621 aaKnown RBP eCLIP12.63□□□□□ -0.39
DNMT1-211ENST00000586988 BCAR1P56945 870 aa12.63□□□□□ -0.39
DNMT1-211ENST00000586988 JAM2P57087 298 aa12.63□□□□□ -0.39
DNMT1-211ENST00000586988 APBA1Q02410 837 aa12.63□□□□□ -0.39
DNMT1-211ENST00000586988 ARID5BQ14865 1188 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms