RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 DPH6Q7L8W6 267 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 NEK11Q8NG66 645 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 BAP1Q92560 729 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 ELMO3Q96BJ8 720 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 ZNF560Q96MR9 790 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 FAM193BQ96PV7 902 aaPredicted RBP14.67□□□□□ -0.06
ITGB4-209ENST00000583327 UBE2OQ9C0C9 1292 aaKnown RBP14.67□□□□□ -0.06
ITGB4-209ENST00000583327 GPR88Q9GZN0 384 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 MARCH5Q9NX47 278 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 DNAJC12Q9UKB3 198 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.67□□□□□ -0.06
ITGB4-209ENST00000583327 TDRD15B5MCY1 1934 aaKnown RBP14.66□□□□□ -0.06
ITGB4-209ENST00000583327 CARNS1A5YM72 827 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 M0QZQ0 153 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 TULP1O00294 542 aaPredicted RBP14.66□□□□□ -0.06
ITGB4-209ENST00000583327 ITGB1P05556 798 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 ACO1P21399 889 aaKnown RBP14.66□□□□□ -0.06
ITGB4-209ENST00000583327 ASPAP45381 313 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 TRIM14Q14142 442 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 BTG3Q14201 252 aaPredicted RBP14.66□□□□□ -0.06
ITGB4-209ENST00000583327 ZNF699Q32M78 642 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 WDR72Q3MJ13 1102 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 SV2CQ496J9 727 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 PAN2Q504Q3 1202 aaKnown RBP14.66□□□□□ -0.06
ITGB4-209ENST00000583327 TIGD5Q53EQ6 642 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 ZNF667Q5HYK9 610 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 FAM117BQ6P1L5 589 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 GJB7Q6PEY0 223 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 RNF168Q8IYW5 571 aaPredicted RBP14.66□□□□□ -0.06
ITGB4-209ENST00000583327 RABGGTAQ92696 567 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 YME1L1Q96TA2 773 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 COLEC11Q9BWP8 271 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 STK33Q9BYT3 514 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 IMPG2Q9BZV3 1241 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 NIF3L1Q9GZT8 377 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 SDCBP2Q9H190 292 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 CYP3A43Q9HB55 503 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 UBE2TQ9NPD8 197 aaPredicted RBP14.66□□□□□ -0.06
ITGB4-209ENST00000583327 FAM207AQ9NSI2 230 aaPredicted RBP14.66□□□□□ -0.06
ITGB4-209ENST00000583327 CEP72Q9P209 647 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 IMPACTQ9P2X3 320 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 MYO6Q9UM54 1294 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 FAN1Q9Y2M0 1017 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 FHOD1Q9Y613 1164 aa14.66□□□□□ -0.06
ITGB4-209ENST00000583327 MRPL42Q9Y6G3 142 aaKnown RBP14.66□□□□□ -0.06
ITGB4-209ENST00000583327 F8W810 466 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 TACC1O75410 805 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 B3GAT3O94766 335 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 KIF4AO95239 1232 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 CYP11A1P05108 521 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 TBXAS1P24557 533 aaPredicted RBP14.65□□□□□ -0.06
ITGB4-209ENST00000583327 OR1G1P47890 313 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 FXR1P51114 621 aaKnown RBP eCLIP14.65□□□□□ -0.06
ITGB4-209ENST00000583327 POLR2FP61218 127 aaKnown RBP14.65□□□□□ -0.06
ITGB4-209ENST00000583327 CUL2Q13617 745 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 SOWAHAQ2M3V2 549 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 FAM109BQ6ICB4 259 aaPredicted RBP14.65□□□□□ -0.06
ITGB4-209ENST00000583327 KCNT2Q6UVM3 1135 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 RRAGAQ7L523 313 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 TMC6Q7Z403 805 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 TOP6BLQ8N6T0 577 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 CCDC150Q8NCX0 1101 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 SHC3Q92529 594 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 KAT5Q92993 513 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 SUSD3Q96L08 255 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 SENP8Q96LD8 212 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 RNPC3Q96LT9 517 aaKnown RBP14.65□□□□□ -0.06
ITGB4-209ENST00000583327 PPP1R9BQ96SB3 815 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 POLIQ9UNA4 740 aa14.65□□□□□ -0.06
ITGB4-209ENST00000583327 R3HCC1Q9Y3T6 440 aaKnown RBP14.65□□□□□ -0.06
ITGB4-209ENST00000583327 GABRDO14764 452 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 TLL1O43897 1013 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 LAG3P18627 525 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 TRIM21P19474 475 aaKnown RBP14.64□□□□□ -0.07
ITGB4-209ENST00000583327 HNRNPH3P31942 346 aaKnown RBP14.64□□□□□ -0.07
ITGB4-209ENST00000583327 MFAP3P55082 362 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 ZBED6P86452 979 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 INCA1Q0VD86 236 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 LRMPQ12912 555 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 TMEM173Q86WV6 379 aaPredicted RBP14.64□□□□□ -0.07
ITGB4-209ENST00000583327 SLC39A11Q8N1S5 342 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 PPM1KQ8N3J5 372 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 FIBCD1Q8N539 461 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 SPATA18Q8TC71 538 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 BCL7CQ8WUZ0 217 aaPredicted RBP14.64□□□□□ -0.07
ITGB4-209ENST00000583327 PCMTD1Q96MG8 357 aaPredicted RBP14.64□□□□□ -0.07
ITGB4-209ENST00000583327 ARID3AQ99856 593 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 ZBED2Q9BTP6 218 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.64□□□□□ -0.07
ITGB4-209ENST00000583327 AIPL1Q9NZN9 384 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 NXF1Q9UBU9 619 aaKnown RBP14.64□□□□□ -0.07
ITGB4-209ENST00000583327 ADAM28Q9UKQ2 775 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 PCDHA11Q9Y5I1 949 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 SNX9Q9Y5X1 595 aa14.64□□□□□ -0.07
ITGB4-209ENST00000583327 SCN1AP35498 2009 aa14.63□□□□□ -0.07
ITGB4-209ENST00000583327 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.63□□□□□ -0.07
ITGB4-209ENST00000583327 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.63□□□□□ -0.07
ITGB4-209ENST00000583327 LCHNA4D1U4 455 aa14.63□□□□□ -0.07
ITGB4-209ENST00000583327 GRXCR1A8MXD5 290 aa14.63□□□□□ -0.07
ITGB4-209ENST00000583327 FOXN3O00409 490 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms